GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, congested, unusually autolyzed
|
Acceptable
|
 |
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-2626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces. Late stage Hashimoto's thyroiditis with regressive/fibrotic changes, prominent lymphoid follicles, rep ones delineated
|
Acceptable
|
 |
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-2726 |
Ovary
|
PAXgene |
2
|
2 pieces, typical post menopopausal appearance, unremarkable
|
Acceptable
|
 |
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-2826 |
Uterus
|
PAXgene |
1
|
2 pieces, 97% myometrium, a few mintue 5mm foci of autolyzed endometrial stroma; no viable glands
|
Acceptable
|
 |
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-2926 |
Vagina
|
PAXgene |
2
|
6 pieces, 99% stroma, trace sloughing autolyzed squamous mucosa
|
Acceptable
|
 |
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-3026 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, Purkinje layer with minimal hypoxic change
|
Acceptable
|
 |
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-3126 |
Brain - cortex
|
PAXgene |
1
|
4 pieces
|
Acceptable
|
 |
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-3226 |
Pituitary gland
|
PAXgene |
2
|
1 pieces; ~10% of specimen is neurohypophysis; rest is adenohypophysis
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0126 |
Adrenal glands
|
PAXgene |
1
|
4 pieces; 3 with attached adipose tissue (up to 30% of submitted tissue)
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; some intimal thickening
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0326 |
Thyroid gland
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0426 |
Lung
|
PAXgene |
0
|
2 pieces; some emphysematous change and atelectasis
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; relatively well-trimmed with small focus of mucous glands
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0626 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; squamous mucosa represents from 15-30% of thickness; small portion of muscularis propria on one piece (marked)
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0726 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; good specimens, muscularis only
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0826 |
Stomach
|
PAXgene |
1
|
6 pieces; mucosa and submucosa
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-0926 |
Spleen
|
PAXgene |
1
|
2 pieces; congested
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1026 |
Pancreas
|
PAXgene |
1
|
2 pieces; approximately 10% fat (internal and attached);
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1126 |
Omentum
|
PAXgene |
1
|
2 pieces; central hole in one piece; few small vessels.
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1226 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; well-trimmed. Squamous epithelium is ~ 1% of thickness. Dermatophytes identified.
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1326 |
Ileum
|
PAXgene |
1
|
6 pieces; muscularis propria present in several pieces (not target); lymphoid elements prominent in several pieces (marked).
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mucosa represents ~15% of thickness.
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 with small regions of residual mucosa (not fully trimmed).
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1626 |
Prostate
|
PAXgene |
1
|
2 pieces; few foci of chronic inflammation; glands cover ~50% of the total specimen
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1726 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis.
|
Acceptable
|
 |