GTEX-1POEN
|
21-40
|
Female
|
GTEX-1POEN-2726 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1POEN
|
21-40
|
Female
|
GTEX-1POEN-2826 |
Pituitary gland
|
PAXgene |
1
|
1 piece, adenohypophysis; ~4x1.5mm nubbin of neurohypophysis (delineated) is ~10% of tissue
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; trace adherent fat; squamous epithleium is ~35 microns
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is ~35-40 microns
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; interstitial fat/vascular elements are ~10% of tissue
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces (fragmented); bare trace adherent fat
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, one with adherent fibrous tissue up to ~1.5mm; other is sectioned at a bifurcation; sample carefully
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0626 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~15-20% fascia/vascular elements; rep delineated
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0726 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; unusually well-preserved. Glomeruli present
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0826 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; ~30% adherent/interstitial fat/fibrous tissue, rep delineated
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-0926 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, trace adherent fat, delineated
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1026 |
Omentum
|
PAXgene |
1
|
2 pieces (fragmented), ~30-40% interstitial hypertrophic mesothelium/fascia
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1226 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis is present, appears reduced
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; mucosa up to ~0.8mm, 20-25% thickness
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1426 |
Prostate
|
PAXgene |
1
|
2 pieces, glandular hyperplastic pattern in one section; other is largely stromal with prominent peri-prostatic ganglion delineated
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1526 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, ~60% glandular elements (delineated); 1 fragment largely stroma, sample carefully
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.3mm, ~10-15% thickness; submucosal mucus glands present, rep delineated
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1726 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibroadipose elements only, gynecomastoid stromal hyperplasia
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa up to ~0.3mm, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-2126 |
Ileum
|
PAXgene |
2
|
4 pieces, mucosa with moderate-severe autolysis; no target lymphoid aggregates present
|
Unacceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-2226 |
Colon, sigmoid
|
PAXgene |
1
|
5 pieces, confirmed target muscularis; trace autolyzed mucosa, stromal elements
|
Acceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-2326 |
Pancreas
|
PAXgene |
1
|
2 pieces, generally mild focally moderate saponification; islets generally well preserved, rep delineated
|
Acceptable
|
 |