GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 full thickness colon, 3 muscularis only
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 are muscularis only, 3 are full thickness (mucosa not target)
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; mature fat with some central defects, <10% fibrous component
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1926 |
Artery - tibial
|
PAXgene |
1
|
3 pieces; 2 pieces are artery with focal intimal thickening, 3rd piece is fat/fibrous/nerve
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2026 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; nerve with partial rim of fat comprising 25-40% of the specimen
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; skeletal muscle with small portion of tendon, fat
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; includes up to ~20% attached fat, epidermis measures 33 microns
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; mature fat with scant fibrous component, focal fat necrosis
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~50% fascia/vascular elements, rep delineated. Sample with caution
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace adherent fat. Squamous epithelium up to ~30 microns
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace nubbins adherent fat, rep delineated
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, nubbins of adherent fascia up to ~1mm, rep delineated
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces (fragmented); ~10% interstitial fat/vascular elements, rep delineated; few foci of inflammatory myositis, rep encircled
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0626 |
Omentum
|
PAXgene |
0
|
2 pieces, 5-10% fascia/mesothelium/vascular elements, rep delineated
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0726 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-0926 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~0.7mm, ~20% of thickness. Focal mild microcystic metaplasia, rep foci delineated
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1026 |
Aorta
|
PAXgene |
1
|
6 pieces, atherosis up to ~0.3mm
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1126 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis is present
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1226 |
Prostate
|
PAXgene |
1
|
2 pieces, mild gland hyperplastic pattern
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, no target lymphoid aggregates present
|
Unacceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, well-preserved mucosa up to ~0.35mm, ~10-15% thickness
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium is ~35-40 microns
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1626 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, all glandular elements
|
Acceptable
|
|