GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1326 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5% fascia/vascular elements; rep delineated
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1426 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis present; appears reduced
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; adherent serosal fat up to ~4mm nubbins, rep delineated
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous mucosa up to ~0.35mm, ~25% thickness. Rare mucus glands present; rep delineated
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1826 |
Stomach
|
PAXgene |
1
|
6 pieces, well-preserved mucosa up to ~1.4mm, ~80% of thickness
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1926 |
Minor salivary glands
|
PAXgene |
0
|
2 pieces, ~99% glandular elements; good specimen
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, surface mucosa moderately autolyzed, up to ~0.3mm
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2226 |
Prostate
|
PAXgene |
1
|
2 pieces, hyperplastic glandular pattern
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2326 |
Ileum
|
PAXgene |
1
|
4 pieces, ~5-10% target lymphoid aggregates, rep delineated
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; 1 piece includes portion of capsule (target region is 5mm below capsule)
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; some carryover noted
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0326 |
Heart
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0426 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 50-60% is fat/fibrous/blood
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; predominantly fat with lesser portion of vein, smaller artery
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0626 |
Lung
|
PAXgene |
1
|
2 pieces; numerous macrophages, areas of collapse, fibrosis, and dilated spaces, some carryover (circled)
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0726 |
Liver
|
PAXgene |
1
|
2 pieces; 1 piece includes portion of capsule (target region is 1cm below), steatosis
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; patchy eosinophilic squamous surface, chronic inflammation, and hyperplasia c/w reflux, fragment of mucosa of GE junction
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; predominantly muscularis, some residual submucosa/fat
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1026 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; mucosa, not muscularis
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1126 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa and submucosa, superficial sloughing/autolysis
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; mature fat
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1326 |
Pancreas
|
PAXgene |
1
|
2 pieces; trivial attached fat, some fibrosis /atrophy
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1426 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair-bearing skin with from ~5-15% internal and attached fat
|
Acceptable
|
|