GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-2726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, mucosa is moderately autolyzed
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-0926 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-1026 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, cortex, ~15-20% adherent/interstitial fat, rep delineated
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-1426 |
Lung
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-1526 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, moderately advanced autolysis, no abnormalities
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-1926 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, squamous mucosa sloughing, residual thickness up to ~0.15m
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-2326 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~1mm, moderate-advanced autolysis
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-2626 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular component with advanced mucosal autolysis
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-2826 |
Testis
|
PAXgene |
2
|
2 pieces, moderately advanced autolysis
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-3126 |
Pituitary gland
|
PAXgene |
2
|
1 pieces, mainly adenohypophysis; trace nubbin (~1mm) neurohypophysis, delineated
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 1 with 70% fat, other with 80% fibrofatty content;
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; moderate interstitial fibrosis; tubules severely autolyzed, glomeruli in relatively good shape
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1226 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; nodular hyperplasia with prominent amounts of colloid
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces; 1 piece is pancreas with focal fibrosis & 25% fat content; other piece has 90% fat, 10% fibrovascular content with no pancreatic tissue
|
Unacceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1826 |
Prostate
|
PAXgene |
2
|
2 pieces; glands vary from moderate to severe autolysis
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1926 |
Spleen
|
PAXgene |
2
|
2 pieces; moderate congestion
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-2226 |
Ileum
|
PAXgene |
2
|
6 pieces; no lymphoid nodules present
|
Unacceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-2326 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; half show eosinophilic edge artifact: drying, stabilizer before fixative?
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, intact muscle
|
Acceptable
|
|
GTEX-1I19N
|
61-70
|
Male
|
GTEX-1I19N-0226 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; mild to moderate autolysis and sloughed follicular epithelium; small portion of attached fat and skeletal muscle fibers (outlined)
|
Acceptable
|
|
GTEX-1I19N
|
61-70
|
Male
|
GTEX-1I19N-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; epithelium sloughing/absent in some sections; muscularis (not target) also present
|
Unacceptable
|
|
GTEX-1I19N
|
61-70
|
Male
|
GTEX-1I19N-1726 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately autolyzed adrenal cortex and medulla; one contains 15% to 20% fibrous tissue other ~20% external fat
|
Acceptable
|
|
GTEX-1I19N
|
61-70
|
Male
|
GTEX-1I19N-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; mild to moderate autolysis; interstitial fibrosis and scarring (rep arrowed); rare sclerosed glomeruli (rep outlined); one piece contains at the tip large vessel walls (outlined)
|
Acceptable
|
|
GTEX-1I19N
|
61-70
|
Male
|
GTEX-1I19N-2226 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma with multinodular parenchyma; glands severely autolyzed, epithelial hyperplasia
|
Acceptable
|
|
GTEX-1I19N
|
61-70
|
Male
|
GTEX-1I19N-2426 |
Ileum
|
PAXgene |
2
|
4 pieces; autolyzed with lack of target lymphoid aggregates
|
Unacceptable
|
|