GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2526 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; muscularis (target) and severely autolyzed mucosa (not target)
|
Unacceptable
|
|
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2726 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis; 30% and 10% internal fat; thick walled vessel
|
Unacceptable
|
|
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-2326 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; totally autolyzed epithelium
|
Unacceptable
|
|
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-2526 |
Stomach
|
PAXgene |
3
|
6 pieces; totally autolyzed mucosa, no muscularis sampled
|
Unacceptable
|
|
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; well sampled autolyzed mucosa, but no lymphoid nodules present
|
Unacceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-1526 |
Gastroesophageal junction
|
PAXgene |
3
|
6 pieces, mucosa present, 20-30% thickness, autolyzed, gastric type, incorrect target
|
Unacceptable
|
|
GTEX-13NZB
|
21-40
|
Male
|
GTEX-13NZB-1626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all are full thickness (target is muscularis)
|
Unacceptable
|
|
GTEX-13NZB
|
21-40
|
Male
|
GTEX-13NZB-1726 |
Ileum
|
PAXgene |
2
|
6 pieces; predominantly muscularis and fat (not target) with minimal residual autolyzed mucosa and rare lymphoid aggregate
|
Unacceptable
|
|
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2626 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa only present: autolyzed
|
Unacceptable
|
|
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2726 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; mucosa only present: autolyzed; prominent melanosis coli (good for LCM)
|
Unacceptable
|
|
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2826 |
Ileum
|
PAXgene |
3
|
6 pieces; ileal mucosa with insufficient lymphoid tissue for GTEx
|
Unacceptable
|
|
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0526 |
Pancreas
|
PAXgene |
1
|
2 pieces, mainly fat, only ~10% pancreatic parenchyma, delineated
|
Unacceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-1226 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; largely sloughed squamous mucosa; may be used for LCM
|
Unacceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2026 |
Pancreas
|
PAXgene |
2
|
2 pieces; 80 & 50% fat; partial (20%) atrophy in 1. May be used for LCM.
|
Unacceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2126 |
Gastroesophageal junction
|
PAXgene |
3
|
6 pieces; 3 gastric and 3 esophageal mucosal specimens
|
Unacceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; no lymphoid tissue
|
Unacceptable
|
|
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-1526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; no coronary artery: 1 is vein, other is fatty tissue
|
Unacceptable
|
|
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-2826 |
Prostate
|
PAXgene |
1
|
2 pieces; no prostate; appears to be bladder wall
|
Unacceptable
|
|
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; 30% admixed skeletal muscle
|
Unacceptable
|
|
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece; no pituitary, only nerves and stroma
|
Unacceptable
|
|
GTEX-13OVG
|
61-70
|
Male
|
GTEX-13OVG-1826 |
Prostate
|
PAXgene |
1
|
2 pieces, predominantly seminal vesicle; not GTEx target tissue
|
Unacceptable
|
|
GTEX-13OVG
|
61-70
|
Male
|
GTEX-13OVG-5013 |
Prostate
|
Dry Ice |
|
1 piece, correlates with PGT fixed tissue, mainly stroma,no seminal vesicle glandular elements, no definitive prostate glands noted
|
Unacceptable
|
|
GTEX-13OVI
|
61-70
|
Female
|
GTEX-13OVI-0226 |
Coronary artery
|
PAXgene |
1
|
Epicardial fat and myometrium no coronary artery present
|
Unacceptable
|
|
GTEX-13OVJ
|
51-60
|
Female
|
GTEX-13OVJ-1626 |
Ileum
|
PAXgene |
2
|
5 pieces; moderatley to severely autolyzed mucosa with muscularis (not target), no significant lymphoid component (target)
|
Unacceptable
|
|
GTEX-13OVJ
|
51-60
|
Female
|
GTEX-13OVJ-1926 |
Pancreas
|
PAXgene |
3
|
2 pieces; severely autolyzed
|
Unacceptable
|
|