GTEX-145MN
|
21-40
|
Male
|
GTEX-145MN-2026 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; salivary glands in both but comprise only 30% & 5% of samples, remainder is skin and muscle. LCM
|
Unacceptable
|
 |
GTEX-145MO
|
61-70
|
Male
|
GTEX-145MO-2226 |
Stomach
|
PAXgene |
3
|
2 pieces, embedded "en face" sp thickness not evaluable. Autolysis moderately advanced in mucosa
|
Acceptable
|
 |
GTEX-146FQ
|
21-40
|
Male
|
GTEX-146FQ-1726 |
Prostate
|
PAXgene |
1
|
2 pieces; 1 consists of fibromuscular stroma only and other is composed of tubuloalveolar glands embedded in fibromuscular stroma; two tiny separated prostatic tissue fragments
|
Acceptable
|
 |
GTEX-14753
|
61-70
|
Male
|
GTEX-14753-0726 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; 20% dermal fat in the 2 larger pieces
|
Acceptable
|
 |
GTEX-14753
|
61-70
|
Male
|
GTEX-14753-1426 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 10% fat & fibrous in 1
|
Acceptable
|
 |
GTEX-14753
|
61-70
|
Male
|
GTEX-14753-2126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 30% external fat in 2 pieces
|
Acceptable
|
 |
GTEX-14753
|
61-70
|
Male
|
GTEX-14753-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; sparse lymphoid nodules [annotated] in autolyzed mucosa; LCM
|
Unacceptable
|
 |
GTEX-1477Z
|
61-70
|
Male
|
GTEX-1477Z-2326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, unusually poorly preserved, squamous mucosa partly to in some areas totally sloughed, residual is ~50-100 microns thick
|
Acceptable
|
 |
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1426 |
Uterus
|
PAXgene |
1
|
2 pieces; no endometrium in this section; myometrium and 5% to 40% vessels
|
Acceptable
|
 |
GTEX-147GR
|
61-70
|
Male
|
GTEX-147GR-1826 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; tiny (<1mm) squamous island in 1 piece [marked]
|
Acceptable
|
 |
GTEX-147GR
|
61-70
|
Male
|
GTEX-147GR-2126 |
Stomach
|
PAXgene |
2
|
6 pieces; most of the autolysis is in the superficial epithelium
|
Acceptable
|
 |
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; large central defects (?poor fixation), portion of large vessel in 1 piece
|
Acceptable
|
 |
GTEX-14A6H
|
21-40
|
Male
|
GTEX-14A6H-1026 |
Omentum
|
PAXgene |
1
|
2 pieces (fragmented); some defects in one piece (?poor fixation)
|
Acceptable
|
 |
GTEX-14AS3
|
41-50
|
Female
|
GTEX-14AS3-1226 |
Ileum
|
PAXgene |
2
|
5 pieces; mucosa with good lymphoid component in 2 of 5 pieces
|
Acceptable
|
 |
GTEX-14AS3
|
41-50
|
Female
|
GTEX-14AS3-1826 |
Uterus
|
PAXgene |
0
|
2 pieces; myometrium only in this section
|
Acceptable
|
 |
GTEX-14ASI
|
61-70
|
Male
|
GTEX-14ASI-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; atrophy with 50% fibrous and fatty replacement in 1, 30% in other
|
Acceptable
|
 |
GTEX-14BIN
|
51-60
|
Female
|
GTEX-14BIN-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; foci of splenic tissue carry-over on surface and ? in vessels; 40% & 10% internal fat
|
Acceptable
|
 |
GTEX-14BIN
|
51-60
|
Female
|
GTEX-14BIN-0926 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; mild plaque; prominent medial calcium deposits in 1.
|
Acceptable
|
 |
GTEX-14C5O
|
61-70
|
Male
|
GTEX-14C5O-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, occasional sclerotic glomeruli
|
Acceptable
|
 |
GTEX-14C5O
|
61-70
|
Male
|
GTEX-14C5O-2826 |
Prostate
|
PAXgene |
2
|
2 pieces; predominantly stroma with some glands with sloughing epithelium, small component of skeletal muscle in one piece
|
Acceptable
|
 |
GTEX-14E6C
|
41-50
|
Male
|
GTEX-14E6C-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; several small ducts in 1 piece [marked]
|
Acceptable
|
 |
GTEX-14E6D
|
51-60
|
Male
|
GTEX-14E6D-2526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections; congestion
|
Acceptable
|
 |
GTEX-14E6E
|
21-40
|
Male
|
GTEX-14E6E-1326 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; several small mammary ducts in adipose tissue, too small for any analysis except LCM
|
Acceptable
|
 |
GTEX-14E7W
|
61-70
|
Male
|
GTEX-14E7W-1526 |
Liver
|
PAXgene |
1
|
2 pieces; congestion; distended sinusoids and fine droplets of bile in cytoplasm of the liver cells;
|
Acceptable
|
 |
GTEX-14E7W
|
61-70
|
Male
|
GTEX-14E7W-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
4 pieces; large [up to 1.8x0.5mm] submucosal glands in 3 pieces, congestion and 161um thick squamous epithelium
|
Acceptable
|
 |