GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2226 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 7x6.5 & 7.5x6mm; 1, 60% adipose; other >90% adipose
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2326 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7.5x2mm; 3 pieces are cortex (autolysis=2); 3 are medulla (autolysis=3)
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 7x3mm; mostly mucosa/submucosa (targets) but extensively autolyzed; small lymphoid foci
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2526 |
Stomach
|
PAXgene |
2
|
6 pieces, up to 10x3mm; mucosa autolysis= 2 and 3; muscularis = 2
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x3mm; mucosa mostly 3, some foci are 2; muscularis=2 (autolysis)
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x1.5mm; all muscle (target)
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2826 |
Prostate
|
PAXgene |
3
|
2 pieces, 9x9 & 8.5x8mm; glands 2 to 3; stroma= 1 (autolysis)
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2926 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, up to 6x3mm; subarachnoid hemorrhage in all (history of trauma).
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, up to 8x5.5mm;
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece, 7x4mm; 20% hemorrhagic stroma (history of trauma)
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0126 |
Testis
|
PAXgene |
2
|
2 pieces, 9x6 & 9x6mm; Reduced spermatogenesis.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 8x3mm; Well trimmed, free of subcutaneous adipose.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 8x7 & 6x6mm; Large vessel (5x1.5mm) runs through 1 piece.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 5x2 & 7x2.5mm; Well trimmed nerve: <5% adipose.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0526 |
Artery - tibial
|
PAXgene |
2
|
2 pieces, 3x2 & 3x2mm; Heavily calcified.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0626 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces, 10x7 & 9.5x8mm; Fatty infiltration, fibrosis and irregular fiber size c/w atrophy. 30% adipose.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0726 |
Atrial appendage
|
PAXgene |
2
|
2 pieces, 9x8 & 7.5x7mm; Mild interstitial fibrosis.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0826 |
Coronary artery
|
PAXgene |
2
|
2 pieces, 3.5x3 & 4x3mm; Both pieces heavily calcified; one has 1x1.7 mm adipose replacing wall.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0926 |
Heart
|
PAXgene |
2
|
2 pieces, 10x7 & 9x7.5mm; Scattered foci of fibrosis. 0.5 mm thick subpericardial adipose on one side of larger piece.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1026 |
Lung
|
PAXgene |
2
|
2 pieces, 9x7 & 8x7mm; Mucopurulent exudates in bronchi, but no pneumonia.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1126 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 8x2mm; Mild plaque formation.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 7x2mm; Well dissected mucosa with some epithelial detachment.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1326 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 8x3mm; Well trimmed, muscularis free of adipose.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1426 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, up to 9x4mm; Muscle with outer bands of adipose tissue up to 1.5 mm thick (should be trimmed of adipose)..
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1526 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, 7x6 & 9x6mm; Foci of fibrosis.
|
Acceptable
|
 |