GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mucosa and muscularis
|
Acceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 are full thickness (mucosa not target)
|
Unacceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; predominantly muscularis (not target) with autolyzed mucosa and only focal lymphoid elements
|
Unacceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; variably sized follicles, some fibrosis
|
Acceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1826 |
Omentum
|
PAXgene |
1
|
2 pieces; over-sized and with central defects (?poor fixation)
|
Acceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; mucosa (not target), not muscularis
|
Unacceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-2026 |
Pancreas
|
PAXgene |
1
|
2 pieces; one is 60% attached fat and vessels, second is ~20% fat, fibrosis, PanIN IA
|
Acceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-2126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; one is 70% salivary gland (circled) with focal acute inflammation/30% skeletal muscle and nerve, second is all lip, nerve, skeletal muscle and fat
|
Unacceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-2226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; includes 5-10% fat, epidermis measures 36 microns in thickness
|
Acceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; includes few small vessels and nerve
|
Acceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-2426 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; includes 5-10% mostly internal fat
|
Acceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-2526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; minimal attached fat
|
Acceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-2626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is ~60 microns
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~20% vascular, fascia, peripheral nerve elements, rep. delineated
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace rim of adherent fat, ~0.2mm
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no adherent fat/ atherosis
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, minimal interstitial fat
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0626 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, minimal adherent dermal fat, squamous epithelium is ~70 microns
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0726 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis is present
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, mainly fibroadipose elements; trace ducts, rep delineated
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-0926 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-1026 |
Lung
|
PAXgene |
2
|
2 pieces, mild congestion
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-1126 |
Aorta
|
PAXgene |
1
|
6 pieces, atherosis layer up to ~1mm
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-1226 |
Omentum
|
PAXgene |
1
|
2 pieces <5% fascia, rep delineated
|
Acceptable
|
|