GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-1326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, up to 13x4mm; squamous epithelium is ~1.5% thickness
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-1426 |
Stomach
|
PAXgene |
1
|
1 piece, 8x4mm; no mucosa, all muscularis/fat, correlated with 1425
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-1526 |
Minor salivary glands
|
PAXgene |
0
|
2 pieces, 4x2 and 2x2mm; one is 80% glandular, evidence of obstructive sialolith; other is <10% glands, rest muscle/stroma
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-1626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, 6x4 and 4x2mm; one with adherent nubbin of fat, delineated
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-1726 |
Testis
|
PAXgene |
0
|
2 pieces, 9x7 and 6x5mm; well preserved, spermatogenesis is present
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-1826 |
Skin, leg
|
PAXgene |
0
|
1 piece, 9x3mm; correlates with 1825
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-1926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 10x4mm; all muscularis
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 10x2mm; trace adherent contaminant 'floater'mucosal fragments, all muscularis/serosalfat
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-2126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 11x8 and 9x8mm; less than 2% interstitial fat
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-2226 |
Prostate
|
PAXgene |
1
|
2 pieces, 11x6 and 10x9mm; one glandular, other is stroma/ganglion/fat
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-2326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 8x4mm; all muscularis, good specimens
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-2426 |
Colon, transverse
|
PAXgene |
1
|
1 piece, 6x3mm; correlates with 2425, all muscularis/fat
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-2526 |
Esophagus - mucosa
|
PAXgene |
1
|
1 piece, 7x2mm; correlates with 2525 aliquot, mucosa is 390 microns
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 9x6 and 8x7mm; moderate congestion
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 8x8 and 6x5.5mm.
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0326 |
Heart
|
PAXgene |
1
|
2 pieces, 7.5x7.5 and 7x7mm; mild interstitial fibrosis
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces ~2mm d. Ahdherent discontinuous fat 0.5-2mm on both
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0526 |
Lung
|
PAXgene |
1
|
2 pieces, 9x7 and 8x7mm; moderate congestions, chronic pneumontitis
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 13x9.5 and 13x7mm; mild regressive changes
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0726 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 8x2mm; adherent fat/serosa up to 1mm on all.
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0826 |
Liver
|
PAXgene |
1
|
2 pieces, 12x5 and 10x8mm; diffuse macrovesciular steatosis involves ~80% of parenchyma
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0926 |
Omentum
|
PAXgene |
1
|
2 pieces, 13x10 and 9x9mm; multiple penetrating small vessels
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
1 piece (6x1mm). Squamous mucosa is ~0.5mm thick, correlated with -1025 aliquots
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x4mm; mainly muscularis, a few with adherent serosa containing vessels (delineated) or peripheral nerve (ensquared)
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, ranging from 7x5 to 10x4mm; muscularis, good specimens
|
Acceptable
|
|