GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1526 |
Liver
|
PAXgene |
2
|
2 pieces; slight degree of congestion
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1626 |
Spleen
|
PAXgene |
2
|
2 pieces; moderate congestion
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces; 20% internal fat content
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; minimal fat content
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1926 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; tubules and ducts severely autolyzed; glomeruli somewhat better preserved; no sign of chronic or acute lesions
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2026 |
Prostate
|
PAXgene |
2
|
2 pieces; variable acinar autolysis, moderate to severe
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2126 |
Testis
|
PAXgene |
2
|
2 pieces; active spermatogenesis, but poorly preserved
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; <5% dermal fat
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibrofatty tissue without mammary ducts
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed or sloughed; muscle intact; LCM+
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2526 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; well dissected glands with 10% internal fat
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis with up to 20% submucosal stroma
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2726 |
Ileum
|
PAXgene |
1
|
6 pieces; several foci of lymphoid tissue, but mostly muscularis propria; LCM
|
Unacceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2826 |
Stomach
|
PAXgene |
3
|
6 pieces; autolyzed mucosa without muscularis
|
Unacceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2926 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; 1mm external focus of debris, possible bone and tissue [labeled]
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-3026 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece; all adenohypophysis; no neural elements in this cut
|
Acceptable
|
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace dermal fat; squamous epithelium is ~40 microns
|
Acceptable
|
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5-10% fascia/vascular elements, rep delineated
|
Acceptable
|
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~5% interstitial fat/vascular elements, rep delineated
|
Acceptable
|
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, no adherent fat
|
Acceptable
|
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no significant atherosis or adherent fat
|
Acceptable
|
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0626 |
Minor salivary glands
|
PAXgene |
0
|
1 piece, ~95% parenchyma
|
Acceptable
|
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0726 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~35 microns
|
Acceptable
|
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, mild nodular goitrous features. ~20% adherent fibrous tissue, rep delineated
|
Acceptable
|
|