GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-1626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 9x8 & 8x8mm; adipose and fibrous tissue only.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
1 piece, 6x2 mm. similar to 1725, less inflammation, less desquamation (less handling). Well trimmed.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x5mm; well dissected.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 10x5mm; one with small portion of squamous mucosa and mild chronic inflammation
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2026 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8x3.5mm; not well trimmed, 10-20% adipose tissue in aggregate.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2126 |
Prostate
|
PAXgene |
1
|
2 pieces, 10x8 & 8.5x8mm; good glandular component.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2226 |
Testis
|
PAXgene |
1
|
2 pieces, 14x7 & 8x8mm; spermatogenesis.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8.4x3mm. All specimens have mucosa as well as the targeted muscularis propria. Mucosa=2, muscle=1.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2426 |
Colon, transverse
|
PAXgene |
2
|
1 piece, 9x3mm; well trimmed
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2526 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 8x5mm; several small foci of lymphoid tissue (annotated) in severely autolyzed and fragmented mucosa.
|
Acceptable
|
|
GTEX-Y8E5
|
61-70
|
Male
|
GTEX-Y8E5-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to 8x4mm; squamous epithelium ~1%thickness
|
Acceptable
|
|
GTEX-Y8E5
|
61-70
|
Male
|
GTEX-Y8E5-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 9x8 & 10x10mm; dense pink fidbrosu tissue is ~50% of both sections, delineated
|
Acceptable
|
|
GTEX-Y8E5
|
61-70
|
Male
|
GTEX-Y8E5-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 10x7 & 12x8mm; muscle fibers atrophied, interstitial fibrosis
|
Acceptable
|
|
GTEX-Y8E5
|
61-70
|
Male
|
GTEX-Y8E5-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, 8.5x5 & 9x5mm; discontinuous adherent fims of fibrous tissue on both up to 1.1mm. 60-70% occlusive atheroscerosis
|
Acceptable
|
|
GTEX-Y8E5
|
61-70
|
Male
|
GTEX-Y8E5-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, 5.5x5 & 5x5mm; 1.4mm adherent nubbin of fat on one section
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0126 |
Spleen
|
PAXgene |
2
|
2 pieces, 11x11 & 11x11mm; mild congrestion
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 10x9 & 10x8mm; fewe scarred areas
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0326 |
Lung
|
PAXgene |
1
|
2 pieces, 9x6 & 7x6.5mm; patchy chronic and active pneumonitis
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 9x3mm; adherent adventia up to ~1mm along edges of most sections
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 11x6mm; all muscularis, nubbins of attached serosal fibrous tissue up to ~3mm, rep ones delineated
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x4.5mm; all muscularis, good specimens
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
1 piece, 3x1.5mm; squamous mucosa is ~30% thickness
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0826 |
Stomach
|
PAXgene |
1
|
1 piece, 7x5mm; mucoa well - preserved, up to 1mm thick
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-0926 |
Omentum
|
PAXgene |
1
|
2 pieces, 11x7 & 11x5mm; ~<5% fibrous areas, delineated
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-1026 |
Pancreas
|
PAXgene |
1
|
2 pieces, 10x9 & 11x10mm; islets reasonably well-preserved, rep ones delineated
|
Acceptable
|
|