GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-1926 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces. up to 5.5x2mm; superficially sloughed epithelium
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2026 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces. up to 8x3.5mm; well dissected muscle
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2126 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces. up to 6.5x5mm; muscle and submucosa with fibrovascular stroma in 2 pieces up to 2mm in diameter (marked)
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2226 |
Stomach
|
PAXgene |
3
|
6 pieces. up to 8x3mm; mucosa = 3; muscle = 2
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2326 |
Heart
|
PAXgene |
1
|
2 pieces. 9x9 & 7x7mm; hypertrophied fibers
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces. up to 7x2mm; mucosa=3; muscle= 2.
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2526 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 4x2mm; lymphoid tissue = 2; mucosa = 3; lymphoid tissue in all pieces (marked)
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 6x2mm; well dissected muscle
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2726 |
Ovary
|
PAXgene |
1
|
2 pieces. 9x7 & 9x7.5mm; corpora albicans, no ova
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2826 |
Uterus
|
PAXgene |
2
|
2 pieces. 8x7 & 9x8mm; glands=2; muscle = 1; small focus of glands in 1 piece (marked)
|
Acceptable
|
 |
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2926 |
Vagina
|
PAXgene |
2
|
6 pieces. up to 8x3mm; atrophic epithelium =2; wall = 1
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces. up to 8x3mm; squamous epithelium is ~2-3% thickness
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces. 9x7 & 9x8mm; ~10% fibrous components, delineated
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces. 5x3 & 5x3mm; discontinuous adherent fat ~0.5mm, delineated
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces. 3x2 & 3x2mm; atherosclerotic occlusion ~60-70% of lumen
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces. 9x6 & 8x7mm; focal adipose tissue delineated (~5% tissue)
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0626 |
Testis
|
PAXgene |
2
|
2 pieces. 7x5 & 9x7mm; spermatogenesiis present but poorly preserved
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0726 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces. up to 7.5x3mm; squamous epithelium is ~4-5% thickness
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0826 |
Liver
|
PAXgene |
1
|
2 pieces. 9x8 & 10x8mm; minimal steatosis
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0926 |
Spleen
|
PAXgene |
3
|
2 pieces. 8x6.5 & 9x8mm;
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1026 |
Omentum
|
PAXgene |
1
|
2 pieces. 11x7 & 10x7mm;
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1126 |
Pancreas
|
PAXgene |
2
|
2 pieces. 9x8 & 11x7.5mm; moderate-severe saponification. Islets poorly seen; a few encircled
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces. 8.5x7 & 8.5x7mm;
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces. 10x8 & 11x7mm; mainly fat, focal fibrous areas, no ductal elements noted
|
Acceptable
|
 |
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1426 |
Adrenal glands
|
PAXgene |
3
|
2 pieces. 12x6 & 13x4mm; focal adherent fat ~1mm nubbin, all cortex, generally poorly preserved
|
Acceptable
|
 |