GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2626 |
Ileum
|
PAXgene |
1
|
6 pieces ~8x3mm, <10 % muscoa, no Peyer patches, mainly muscle
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 6pieces ~9x3mm, all muscle, no muscosa
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2826 |
Skin, suprapubic
|
PAXgene |
1
|
2 pieces ~7x3mm. Squamous epithelium is < 2-3% of thickness
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0126 |
Liver
|
PAXgene |
1
|
2 pieces, 10x7 & 9x7mm. Central vein congestion and central lobular atrophy.
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0226 |
Pancreas
|
PAXgene |
2
|
2 pieces, 10x9 & 11x11mm. Moderate fibrosis of endocrine and exocrine tissue. (Diabetic history.)
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0326 |
Spleen
|
PAXgene |
1
|
2 pieces, 11x8 & 11x7mm. Slight congestion and good lymphoid tissue.
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0426 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 9x8 & 10x8mm. Good uniform parenchyma.
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0526 |
Lung
|
PAXgene |
1
|
2 pieces, 11x7 & 8x8mm. Heart failure cells. Focal interstitial fibrosis.
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x3 & 4x2mm. Sclerotic. calcified. one >60% occluded by plaque
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0726 |
Heart
|
PAXgene |
1
|
2 pieces, 8x7 & 9.5x8mm; good specimen
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 11x8 & 10x9mm; slight edema
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0926 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 9x2mm; no sclerosis; minimal extraneous adventitial tissue
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 8x3mm; all muscle; well preserved neurons
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 9x2mm; mild chronic inflammation, good squamous mucosa
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 10x3.5mm; all muscle as targeted
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1326 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 6x3mm; mucosa and submucosa, no muscularis
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1426 |
Omentum
|
PAXgene |
1
|
2 pieces, 12x9.5 & 12x8mm; well fixed
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, 13x10 & 13x12mm; All adipose tissue, no adrenal tissue
|
Unacceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1626 |
Kidney - cortex
|
PAXgene |
2
|
7 pieces, up to 9x2mm; arteriolar and glomerular sclerosis consistent with diabetes; ~80% glomeruli are scarred; one piece and half of another piece are medulla
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 9.5x2mm; autolysis ranges from moderate to severe
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x2mm; virtually all muscle as targeted; minute focal mucosa in 2 pieces
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1926 |
Ileum
|
PAXgene |
2
|
6 pieces, up to 10.5x1.5mm; sparse lymphoid nodules, moderately autolyzed; totally autolyzed glands; mucosa and submucosa as targeted, no muscularis
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2026 |
Ovary
|
PAXgene |
1
|
2 pieces, 12x9 & 12x11mm; numerous c. albicans, some follicles
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2126 |
Uterus
|
PAXgene |
2
|
2 pieces, 9x8 & 12x8mm; endometrium in one piece, not in other
|
Acceptable
|
 |
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2226 |
Vagina
|
PAXgene |
1
|
6 pieces, up to 9x3mm; moderate chronic inflammation; >60% sloughed epithelium; good mucosa in 1 piece
|
Acceptable
|
 |