GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 7x3mm; 20-25 % thickn is squqmous mucosa, well-preserved
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces up to 7x3mm; 90% muscularis, rest is serosal fibrous tisssue, delineated
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces up to 10x4mm; Only ~25% muscle (2 aliquots, delineated( rest is fat
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-1826 |
Prostate
|
PAXgene |
1
|
2 pieces 10x7 & 10x7mm Nodular glandular hyperplasia, rep areas delineated
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-1926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces up to 6x5mm; only 3 have visible squamous epithelium ~1% of thickness (delineated) other three are all fat/dermis
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-2026 |
Testis
|
PAXgene |
1
|
2 pieces 8x6 & 8.5x7mm; reduced spermatogenesis; well preserved
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-2126 |
Skin, leg
|
PAXgene |
0
|
6 pieces up to 6.5x4mm Squamous epithelium is ~1-2% thickness
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-2226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces 11x7 & 15x7mm; ~20-30% fibrous bands, rep. areas delineated
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-2326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 10x8 & 9x8mm; minimal interstitial fat
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-2426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces 2.5x2 & 2x2mm; adherent fibrous/peripheral nerve focally, delineated
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-2526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~6x3.5mm, good clean speimens, no adherent fat
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-2626 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces 4x4 & 2x2mm; one aliquot has 1.4mm nodule of gland, the rest (~70%) is squamous mucosa/fibrous tissue, hteo the other is mainly gland (delineated)
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0126 |
Thyroid gland
|
PAXgene |
3
|
2 pieces. 8x6 & 8x6mm;
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces. up to 7x3mm; Well dissected.
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0326 |
Skin, leg
|
PAXgene |
1
|
6 pieces. up to 7x2mm; 3/6 have up to 0.8 mm subcutaneous adipose.
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces. 9x5 & 8x7mm; Well fixed. 5-10% fibrous content.
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces. 9x6 & 8x6mm; 5-10% internal adipose.
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces. 8x7.5 & 8x7mm; Minimal external adipose
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0726 |
Heart
|
PAXgene |
1
|
2 pieces. 9x7 & 9x8mm; Hypertrophied fibers.
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0826 |
Lung
|
PAXgene |
3
|
2 pieces. 8x7 & 6x6mm; Larger piece has extensive pneumonia; organizing thrombi. Smaller piece has interstitial fibrosis and hemorrhage.
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-0926 |
Aorta
|
PAXgene |
1
|
6 pieces. up to 8x2mm; 3/6 have intramural and periaortic hemorrhages c/w trauma [annotated]
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces. up to 7x2mm; Well dissected, well preserved mucosa
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-1126 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces. up to 7x3mm; Well dissected muscularis.
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-1226 |
Nerve - tibial
|
PAXgene |
2
|
2 pieces. 5x4 & 6x4mm; No adipose
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-1326 |
Artery - tibial
|
PAXgene |
1
|
2 pieces. 3x3 & 3x2mm; Severe medial (Monckeberg) calcified sclerosis.
|
Acceptable
|
|