GTEX-1H3NZ
|
61-70
|
Male
|
GTEX-1H3NZ-2426 |
Ileum
|
PAXgene |
2
|
5 pieces; several lymphoid nodules (labeled) with background of autolyzed mucosa. LCM
|
Acceptable
|
 |
GTEX-1H3O1
|
51-60
|
Male
|
GTEX-1H3O1-1626 |
Pituitary gland
|
PAXgene |
2
|
1 piece, adenohypophysis and dura , ~10-20% of specimen(delineated)
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-0826 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; mild interstitial fibrosis and trivial external fat (outlined)
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1026 |
Lung
|
PAXgene |
2
|
2 pieces; marked congestion
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1126 |
Spleen
|
PAXgene |
2
|
2 pieces; marked congestion
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1426 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1526 |
Liver
|
PAXgene |
2
|
2 pieces; consistent with advanced alcoholic cirrhosis: steatosis, Mallory's hyaline, extensive fibrosis, marked cholestasis (rep outlined)
|
Unacceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1726 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; moderate to severe autolysis; largely sloughed mucosa; thick-walled vessels in submucosa; congestion
|
Unacceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately to severely autolyzed adrenal cortex and medulla; 50% and 40% fat content
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; moderate to severe tubular autolysis (sloughed tubular epithelium) and tubular bile casts (rep outlined); diffuse membranoproliferative glomerulonephritis (mesangial cell proliferation and capillary wall thickening)- likely secondary
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; severly autolyzed colonic mucosa and mildly to moderately autolyzed muscularis
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2626 |
Pituitary gland
|
PAXgene |
2
|
1 piece; 85% adenohypophysis and 15% neurohypophysis
|
Acceptable
|
 |
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2726 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; meningeal coverage noted in 2 of 4 pieces (arrows); ensquared portion of cerebellum
|
Acceptable
|
 |
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2726 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma and glands with predominantly sloughed epithelium
|
Acceptable
|
 |
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections (muscularis not target) with partially autolyzed mucosa, rare lymphoid aggregate
|
Unacceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0126 |
Lung
|
PAXgene |
2
|
2 pieces; collapse, some fibrosis, pulmonary macrophages, some congestion, sloughed bronchial epithelium
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0426 |
Aorta
|
PAXgene |
2
|
6 pieces; atherosclerosis
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0526 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; 3 are muscularis, 3 are mucosa (not target)
|
Unacceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0826 |
Artery - tibial
|
PAXgene |
2
|
2 pieces; one includes attached portion of vein/fat; mild, focal plaque
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1126 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; epithelium is partially sloughed, few clusters of submucosal glands
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1326 |
Liver
|
PAXgene |
2
|
2 pieces; steatosis, moderate autolysis
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1426 |
Spleen
|
PAXgene |
2
|
2 pieces; significant component is vessels/trabeculae, portion of fat
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1626 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; tubules are very autolyzed, glomeruli (some sclerotic) in all sections, however, 1 of 6 is predominantly medulla
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1926 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis is present
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2326 |
Stomach
|
PAXgene |
2
|
6 pieces; predominantly mucosa with minimal muscularis, moderate to severe autolysis
|
Acceptable
|
 |