GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-0726 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces; mild to moderat autolysis; generalized atrophy; one contains ~15% internal/external fat, fibromuscular component and empty spaces (arrows)
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces; essentially well preserved parenchyma; Langerhans islets present (rep outlined); attached dense fibrous tissue with ductal structures and fibroadipose tissue with nerves (arrows)
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-0926 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; mild to moderate autolysis; 40% and 30% attached skeletal muscle and fibroadipose tissue (outlined)
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1026 |
Lung
|
PAXgene |
2
|
2 pieces; collapsed alveolar spaces and congestion; bronchus and bronchioles filled with mucus (rep outlined); larger vessels (arrows)
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; stratified squamous epithelium, submucosa with couple of glands (outlined) and muscularis
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis persent
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderate to severe autolysis of colonic mucosa; muscularis preserved; up to 1.6mm attached serosa
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; 3 pieces mostly muscularis, not target; moderate to severe autolysis of mucosa; residual lymphoid aggregates (outlined) are ~ 10 % of tissue
|
Unacceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1526 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue with some fibrovascular component
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; confirmed target muscularis and up to 1.5mm serosa with focal skeletal muscle fibers (outlined)
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1726 |
Ovary
|
PAXgene |
1
|
2 pieces; many follicles, corpora albicanta and lutea in different stages of development
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1826 |
Vagina
|
PAXgene |
1
|
6 pieces; one piece completely devoid of squamous epithelium; well preserved lamina propria
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1926 |
Uterus
|
PAXgene |
1
|
2 pieces; mostly parametrium with prominent thick walled vessels; no target endometrium or myometrium present
|
Unacceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-2026 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair bearing skin with mild to moderate autolysis; 20% to 50% external fat (outlined)
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-2126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; mostly skeletal muscle fibers, nerves and fibrovascular tissue with focal small fragment of squamous epithelium; no target tissue observed
|
Unacceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 50% and 5% adipose tissue; closely packed acini consistent with lactating breast
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-2326 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa and lack of good representation of target muscularis
|
Unacceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-2426 |
Stomach
|
PAXgene |
1
|
6 pieces; mild to moderate autolysis of gastric mucosa; well preserved muscularis
|
Acceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; ; epidermis ~41 microns thick; 5% to 20% of periadnexal (internal) fat; a few hair follicles
|
Acceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue; ~30% fibrous septa with vessels and nerves
|
Acceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; well trimmed skeletal muscle fibers
|
Acceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 15% and 5% external fat
|
Acceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; ~0.25mm rim of adventitia
|
Acceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; mild to moderate autolysis; interstitial fibrosis with lobulation
|
Acceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-0726 |
Lung
|
PAXgene |
1
|
2 pieces; mild to focally moderate autolysis; bronchioles and alveoli filled with hemosiderinophages (rep arrowed); collapsed alveolar spaces (atelectasis)
|
Acceptable
|
|