GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2 mm; mucosa largely autolyzed
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2426 |
Stomach
|
PAXgene |
2
|
6 pieces up to 8x3 mm; only deep mucosa has intact glands
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2526 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces up to 5x5 mm;
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2626 |
Brain - cortex
|
PAXgene |
2
|
4 pieces up to 5x5 mm;
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2726 |
Pituitary gland
|
PAXgene |
2
|
2 pieces: 6x4 mm with good parenchyma; 6x1.7 is largely fibrous tissue
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces ~12x11mm, adherent fat up to~40/50% of both aliquots which are irreuglarly shaped
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces ~10x7mm, ~2.5mm adenomatoid nodule.colloid cyst encircled
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces ~11x9mm, abundant TDLU's, post menopausal appearance, representative areas encircled
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0426 |
Lung
|
PAXgene |
2
|
2 pieces, ~8x8mm. Diffuse intra-alveolar hemorrhage but minimal inflammation
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0526 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces ~7x2mm, squamous mucosa well-preserved, up to 10% thickness
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, ~5x5mm
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0726 |
Stomach
|
PAXgene |
1
|
6 pieces ~8x4mm, mucosa well preserved, 20-40% of thickness
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0826 |
Colon, transverse
|
PAXgene |
0
|
6 pieces, ~7x4mm fragmented/detached msucosa but fairly well preserved, up to 10% thickness
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0926 |
Urinary bladder
|
PAXgene |
2
|
6 pieces ~10x5mm, urothelium largely sloughed, where present less than 1% of thickness
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1026 |
Fallopian tube
|
PAXgene |
1
|
6 pieces ~3.5mm d, mucosa reasonably well perserved
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1126 |
Ovary
|
PAXgene |
1
|
2 pieces ~12x5 , post menopausal appearance, minute (~0.1mm) transitional cell islets noted, ? incipient Brenner tumors
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1226 |
Vagina
|
PAXgene |
1
|
6 pieces ~7x3mm, squmaous mucosa reasonably well preserved, ~5-10% of thickness
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1326 |
Cervix - ectocervix
|
PAXgene |
1
|
4 pieces ~10x4mm ecto and endocervcial mucosa both (transition zone), prominentn Nabothian cysts in one, en squared. Where present, squamous mucosa is 5-10% of thickness
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1426 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces ~10x6mm a few foci of endocervical glands well preserved, encircled, up to ~1.5mm d.
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1526 |
Uterus
|
PAXgene |
1
|
2 pieces ~10x7mm, Scanty proliferative pattern endometrium, reasonably well preserved, up to 2 mm thick on edge of alqiuot
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1626 |
Skin, leg
|
PAXgene |
0
|
6 pieces, ~7x2.5mm, squamous epithelium is ~3-5% of thickness
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1726 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~15x9mm
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1826 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~9x9mm, minmal interstital fat
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~4.5mm d generally clean specimen, trace adherent fat/fibrous tissue
|
Acceptable
|
 |
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-2026 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~6mm d. some interstital fat and focal adherent fat, up to 1mm thick
|
Acceptable
|
 |