GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1926 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, ~ 5.5mm, partial rim of adherent fat on one, ~0.8mm
|
Acceptable
|
 |
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 10x7mm, representative TDLUs encircled
|
Acceptable
|
 |
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-2126 |
Artery - tibial
|
PAXgene |
0
|
2 pieces 3mm, good clean specimens. One addtional small fragment
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x5mm; thin layer of subcutaneous adipose
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 9x6 & 9x8 mm; few central artifacts
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 5x4 & 5x3 mm; ~30% adipose amongst nerve bundles
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces ~2mm arteries & smaller branches; ~20% adipose amongst one aliquot
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 8x6 & 8x7 mm; one has ~10% embedded adipose
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 7x6 & 7x5 mm; minimal extraneous adipose
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 12x8 & 12x5 mm; mammary ducts present; adipose comprises 70 to 90% of aliquots
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0826 |
Lung
|
PAXgene |
1
|
2 pieces 11x6 & 10x8 mm; heart failure cells
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0926 |
Heart
|
PAXgene |
1
|
2 pieces 9x8 & 7x7 mm; patchy fibrosis, enlarged nuclei, hypertrophied muscle fibers; <1mm adipose along one edge
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces ~2mm diameter vessels with eccentric plaques; adipose ~50-60% encases vessels
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1126 |
Aorta
|
PAXgene |
1
|
6 pieces up to 10x1.4 mm; loose adventitia along one side of 4 pieces
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1226 |
Liver
|
PAXgene |
1
|
2 pieces 8x7 & 8x7 mm; large vessel runs through one piece; central congestion
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1326 |
Spleen
|
PAXgene |
2
|
2 pieces 8x7 & 9x8 mm; markedly congested with blood
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1426 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces up to 8x2 mm; mucosa partly sloughed, hyperplastic and chronically inflamed, consistent with gastric reflux
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 7x3 mm; no extraneous adipose
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces 8x6 & 7x7 mm; ~10% adipose within parenchyma (not outside)
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1726 |
Adrenal glands
|
PAXgene |
2
|
2 pieces 17x2 & 16x2 mm with about same amount of peripheral adipose along one edge
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces up to 8x4 mm; all cortex; moderate vascular congestion
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1926 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces 10x7 & 8x8 mm; both have cortex (30-40%) and medulla; moderate vascular congestion
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2026 |
Testis
|
PAXgene |
2
|
2 pieces 10x5 & 10x8 mm; spermatogenesis
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2126 |
Prostate
|
PAXgene |
3
|
2 pieces 11x5 & 9x9 mm; glands totally autolyzed in 9x9mm piece; other piece is fibromuscular (both smooth and striated muscle (peripheral to prostatic parenchyma)
|
Acceptable
|
 |
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2226 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8x3 mm; epithelium sloughed; one piece 80% adipose
|
Acceptable
|
 |