GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 9x7 & 9x7mm; 1 with 50% fibrous tissue (tendon)
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 6x4 & 7x3mm; 20% peripheral adipose
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0426 |
Artery - tibial
|
PAXgene |
2
|
2 pieces, 3x2 & 3x3mm; severe medial calcification; a small 0.7mm artery (and vein) nearby are free of lesions
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0526 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8.5x3mm; all have up to 1.5 mm subcutaneous adipose
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0626 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces, 8x8 & 8.5x8mm; moderate atrophy; 20% internal adipose
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0726 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, 9x7.5 & 9x9mm; extensive fibrosis and lymphoid infiltrate typical of advanced Hashimoto thyoiditis (correlates with patient's hypothyroidism); oxyphilic metaplasia circled
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0826 |
Lung
|
PAXgene |
2
|
2 pieces, 8x7 & 7x6mm; moderate vascular and interstitial fibrosis; heart failure cells
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0926 |
Atrial appendage
|
PAXgene |
2
|
2 pieces, 9x6.5 & 8x7mm; no fat
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 9x8 & 8x8mm; all adipose, no mammary tissue; a few small defects
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1226 |
Heart
|
PAXgene |
1
|
2 pieces, 10x7 & 8x7mm; mild patchy fibrosis
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1326 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 8x2mm; fine medial calcification, no plaques
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1426 |
Liver
|
PAXgene |
2
|
2 pieces, 8x8 & 7x7mm; no lesions
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1526 |
Spleen
|
PAXgene |
2
|
2 pieces, 10x9 & 8x8mm; moderate congestion
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces, 10x9.5 & 8x7.5mm; 10% internal fat
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1726 |
Omentum
|
PAXgene |
1
|
2 pieces, 9x6 & 7x6.5mm; no defects
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1926 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 7x4mm; all muscle
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2026 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, up to 7x3mm; all muscle, no mucosa (good!)
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2126 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 11x8 & 10x8mm; 1 is 90% adipose; other is 20% adipose
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7x2mm; severe glomerulosclerosis consistent with diabetes; no normal glomeruli; mixed cortex and medulla probably due to atrophy of cortex (described grossly)
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2326 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 5x3mm; autolyzed mucosa with small lymphoid groups (marked on image); no muscle (good); lots of submucosal adipose (can't be helped)
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 8x2mm; autolyzed mucosa (3); muscle moderately autolyzed (2)
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2626 |
Prostate
|
PAXgene |
2
|
6 pieces, up to 8x2mm; variable amounts of stroma and hyperplastic glands
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2726 |
Testis
|
PAXgene |
2
|
2 pieces, 7x5 & 7x5mm; reduced spermatogenesis
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x4mm; all have full thickness (muscle target, mucosa not wanted)
|
Acceptable
|
 |
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~6x3mm squamous epithelium is 1.5-2% thickness
|
Acceptable
|
 |