GTEX-SNOS
|
41-50
|
Male
|
GTEX-SNOS-1526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 9x7 & 7x7 mm; larger has ~10% adipose between muscle bundles
|
Acceptable
|
 |
GTEX-SNOS
|
41-50
|
Male
|
GTEX-SNOS-1626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces 5x3 & 4x3 mm; <10% peripheral adipose
|
Acceptable
|
 |
GTEX-SNOS
|
41-50
|
Male
|
GTEX-SNOS-1726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ,2 mm artery; a few punctate calcium deposits in intima; clean, no adipose
|
Acceptable
|
 |
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0126 |
Skin, leg
|
PAXgene |
0
|
5 pieces + one fragment, ~8x2mm. Squamous epithelium is ~2-3% of thickness.
|
Acceptable
|
 |
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~10 x 10mm. One with extreme separation but seems well preserved.
|
Acceptable
|
 |
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces ~8x7mm. Prominent band of scarring/fibrosis encircled, largest confluent focus ~1.5x1mm in one aliquot, ~15 % of specimen
|
Acceptable
|
 |
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~4mm d. Rim of fibrous tissue 0.5 --1mm around larger aliquot
|
Acceptable
|
 |
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~4.5mm d. Discontinuous rims of adherent fat around both ~0.5--1.5mm thick, representative foci encircled.
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0126 |
Spleen
|
PAXgene |
1
|
2 pieces 6x6 & 8x6 mm; mild congestion
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 9x5 & 7x4 mm;
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0326 |
Heart
|
PAXgene |
1
|
2 pieces 8x6 & 7x7 mm; contraction bands; no fibrosis or fat
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0426 |
Aorta
|
PAXgene |
1
|
6 pieces up to 9x2 mm; minimal plaque; minimal adventitial adipose
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces 8x6 & 7x7 mm; cortex; one has ~30% adipose
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0626 |
Lung
|
PAXgene |
1
|
2 pieces 11x4 & 7x7 mm; patchy emphysema and fibrosis; no inflammation
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 7x4 mm; all have mucosa, no muscularis propria
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 8x4 mm; 5 have mucosa and muscularis propria; 1 has only muscularis
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0926 |
Stomach
|
PAXgene |
1
|
6 pieces up to 6x4 mm; 3 have mainly mucosa, 1 largely muscle
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 6x3 mm; 3 have mucosa without muscularis, 3 have muscularis without mucosa
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1126 |
Prostate
|
PAXgene |
1
|
2 pieces 9x7 & 8x7 mm; hyperplasia; one piece with ~30% adipose7on one side
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1226 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 8x5mm; little epithelium, what is present is largely sloughed; lots of tissue fractures
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1326 |
Testis
|
PAXgene |
1
|
2 pieces 8x7 & 8x6 mm; moderately reduced spermatogenesis
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1426 |
Pancreas
|
PAXgene |
1
|
2 pieces 11x4 & 9x7 mm; mild patchy fibrosis; ~10% adipose at one edge; scattered adipose in parenchyma
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces ~2 mm diameter; no lesions; cleaned of adipose
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 10x7 & 9x9 mm; no adipose
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 6x3 & 5x3 mm; virtually fat free;
|
Acceptable
|
 |