2 pieces; interstitial fibrosis and scattered collapsed follicles; congestion
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-0826
Lung
PAXgene
2
2 pieces; congestion, emphysema-like changes, thickened alveolar walls and atelectasis; sloughed bronchial epithelium; one piece contains several noncaseating granulomata with foreign-body type giant cells (outlined)
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-0926
Coronary artery
PAXgene
1
2 pieces; samples appear to be veins
Unacceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1026
Heart
PAXgene
0
2 pieces; interstitial fibrosis with scarring and small amount of internal fat
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1126
Atrial appendage
PAXgene
0
2 pieces; ~ 10% of internal fat
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1226
Aorta
PAXgene
1
6 pieces; atherosclerotic plaque with focal superficial thrombosis (outlined)
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1326
Liver
PAXgene
1
2 pieces; periportal and peribiliary chronic inflammation and fibrosis encroaching on liver parenchyma
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1426
Omentum
PAXgene
0
2 pieces; mature adipose tissue
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1526
Pancreas
PAXgene
1
2 pieces; well preserevd parenchyma and Langerhans islets (rep. outlined); minimal fat
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1626
Spleen
PAXgene
2
2 pieces; marked congestion
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1726
Adrenal glands
PAXgene
2
2 pieces; ~50% external fat and autolyzed cortex grade 2/3
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1826
Kidney - cortex
PAXgene
2
6 pieces; congestion
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-1926
Mammary tissue (breast)
PAXgene
1
2 pieces; numerous ductal structures embedded in fibrotic stroma (gynecomastia) and over 50% external fat
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2026
Testis
PAXgene
1
2 pieces; spermatogenesis present; focal fibrosis and sclerosis of tubules (outlined)
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2126
Prostate
PAXgene
0
2 pieces; fibromuscular stroma only
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2226
Ileum
PAXgene
3
4 pieces; autolyzed glandular epithelium and a few remnants of lymphoid nodules (outlined) LCM
Unacceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2326
Colon, sigmoid
PAXgene
1
6 pieces; essentially well trimmed muscle
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2426
Stomach
PAXgene
2
6 pieces; autolyzed gastric mucosa grade 2/3 and preserved muscularis
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2526
Colon, transverse
PAXgene
3
4 pieces; completely autolyzed mucosa and preserved muscularis
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2626
Esophagus - mucosa
PAXgene
2
6 pieces; one focus of possible submucosal calcification below muscularis (outlined)
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2726
Esophagus - muscularis
PAXgene
1
6 pieces; well trimmed
Acceptable
GTEX-14PJ2
51-60
Male
GTEX-14PJ2-2826
Gastroesophageal junction
PAXgene
1
6 pieces; well trimmed
Acceptable
GTEX-14PJ3
51-60
Male
GTEX-14PJ3-0126
Thyroid gland
PAXgene
0
2 pieces; one is up to 30% fat/vessels, second includes smaller portion of fat/vessels/skeletal muscle