GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2426 |
Testis
|
PAXgene |
2
|
2 pieces, autolysis precludes assessment of spermatogenesis
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, No target lymphoid aggregates, ~70% muscularis/adipose tissue
|
Unacceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.2mm, advanced autolysis, glandular elements sloughed
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2726 |
Colon, sigmoid
|
PAXgene |
1
|
5 pieces, ~40% target muscularis, rest is fat/fibrous tissue
|
Unacceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2826 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, ~90% glandular elements, delineated
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2926 |
Pituitary gland
|
PAXgene |
2
|
1 piece, mainly adenohypophysis, 4x1mm nubbin of neurohypophysis, delineated
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-3126 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5-10% non adipose elements, peripheral nerve, vascular elements (rep delineated)
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, squamous epithelium is ~30-40 microns; tags of adherent dermal fat up to ~0.3mm
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% interstitial fat, rep delineated
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, minimal nubbin of adherent fat (~0.3mm)
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no significant adherenat fat, or atherosis
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0626 |
Minor salivary glands
|
PAXgene |
0
|
3 pieces, nearly pure glandular elements; excellent specimen
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, ~10-15% adherent fat/vascular elements, rep delineated
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0826 |
Skin, suprapubic
|
PAXgene |
0
|
2 pieces, minimal dermal fat; squamous epithelium is ~50 microns
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-0926 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-1026 |
Aorta
|
PAXgene |
1
|
2 pieces, adherent nubbins of faxica/fat, rep delineated; not significant atherosis
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-1126 |
Heart
|
PAXgene |
1
|
2 pieces, mild interstitial fibrosis; ~10% epicardial fat; rep delineated.
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, probalbe branch twigs, >60% of tissue is epicardial fat; insufficient target artery
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-1326 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-1426 |
Pancreas
|
PAXgene |
1
|
2 pieces, variable saponification; ~70% "score 1"; rest score 2 (encircled). Numerous well -preserved Islets, rep delineated.
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; mainly fibroadipose elements; few TDLUs, rep delineated.
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.3mm, ~10-15% thickness. Submucosal mucuis glands present; rep. delineated
|
Acceptable
|
 |
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |