GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-0526 |
Lung
|
PAXgene |
2
|
2 pieces, 8x7 & 8x6mm; focal emphysema, congestion
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 11x9 & 12x8mm; ~40% external and internal fibroadipose tissue
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-0726 |
Coronary artery
|
PAXgene |
2
|
1 piece, 3x2mm; mild fibroatheromatous thickening
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-0826 |
Heart
|
PAXgene |
2
|
2 pieces, 8x7mm & 8.5x5.5mm; ~5% internal adipose tissue
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-0926 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, 10x6 & 8x7mm; 10% external adipose
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1026 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, up to 5x2mm; superficial sloughing of squamous mucosa
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1126 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 7x3mm; well trimmed muscle
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 8x3.5mm; all muscle, no mucosa; 20% adipose on deep surface in 3 of 6 pieces
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1326 |
Liver
|
PAXgene |
2
|
2 pieces, 7x7 & 8x8mm; 60% macrovesicular steatosis
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1426 |
Spleen
|
PAXgene |
2
|
2 pieces, 10x8 & 7x7mm; congested
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1526 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 9x2mm; mural hemorrhage, probably traumatic
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 18x4 & 22x3.5mm; cortex; 40% peripheral adipose
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 6x4 & 6x4mm; 30% peripheral adipose
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7.5x2.5mm; no chronic lesions, some hyperemia; 1 piece mostly medulla, other pieces have medulla (marked on image)
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-1926 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 3x3 & 4x2.5mm; no lesions; 20% peripheral fibroadipose tissue
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2126 |
Stomach
|
PAXgene |
2
|
6 pieces, up to 8x2mm; superficial half of oxyntic mucosa is sloughed, deeper in better condition
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2226 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 6x2mm; abundant lymphoid tissue in autolyzed mucosa, but all 4 pieces have muscularis propria
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x2mm; mucosa = 3; muscularis = 2 (autolysis)
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2426 |
Omentum
|
PAXgene |
1
|
3 pieces, up to 9x7mm; no significant artifacts
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 11x6 & 9.5x8mm; striations retained despite fragmentation
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2626 |
Prostate
|
PAXgene |
1
|
2 pieces, 10x9 & 9x7mm; except for ~5% autolyzed glands, tissue is muscular; 30% adipose in 1 piece; glands = 3, muscle = 1 (autolysis)
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2726 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8x3mm; subcutaneous adipose is up to 1 mm thick in 2 pieces
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2826 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, up to 6.5x2mm; mucosa (unwanted) and muscle (target) in all pieces
|
Acceptable
|
 |
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-0126 |
Thyroid gland
|
PAXgene |
2
|
2 pieces ~9x5mm
|
Acceptable
|
 |
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces ~8x2.5mm, squamous epithelium is ~2-3% of thickness
|
Acceptable
|
 |