GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1426 |
Spleen
|
PAXgene |
3
|
2 aliquots ~8x6mm. Congested.
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1526 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, 8x2mm. Mucosa totally slough save for a few minute foci, badly preserved. Prominent sub mucocal glands encircled
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1626 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, ~8x3mm
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1726 |
Pancreas
|
PAXgene |
3
|
2 aliquots, ~9x7mm. ~10% interstitial fat, marked saponification, poorly preserved
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1826 |
Adrenal glands
|
PAXgene |
3
|
2 aliquots ~12x6mm. LDACC NOTE: Adrenal cortex is only ~40% of both, 60% is fat in both, encircled
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, ~6.5x2.5mm . Tublules moderately--severely autolyzed.
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2026 |
Kidney - medulla
|
PAXgene |
2
|
2 aliquots, ~9x8mm. LDACC ALERT: Medulla is ~ 80% of one, ensquared; the other is all cortex
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2126 |
Stomach
|
PAXgene |
2
|
6 pieces, 7x2.5mm. Mucosa is ~30-50% of thickness, poorly preserved
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, 7x2mm. Mucosa totally autolyzed
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2326 |
Urinary bladder
|
PAXgene |
3
|
6 pieces, ~10x2.5mm. Urothelium completely sloughed
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2426 |
Prostate
|
PAXgene |
3
|
2 aliquots, ~8x7mm. Glandular mucosa completely autolyzed
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2526 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces, ~4x3mm
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2626 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, ~5x3mm
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2726 |
Pituitary gland
|
PAXgene |
2
|
1 aliquot; ~5x4mm adenohypophysis ensquared, attached ~1.5x1.5mm neurohypophysis fragment, encircled. Connecting band of fibrous tissue
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0126 |
Spleen
|
PAXgene |
1
|
2 pieces 10x7 & 10x6 mm; slight congestion
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0226 |
Thyroid gland
|
PAXgene |
0
|
2 pieces 10x6 mm; 10% peripheral fibroadipose
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0326 |
Aorta
|
PAXgene |
1
|
6 pieces up to 10x1.5 mm; no plaques
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0426 |
Lung
|
PAXgene |
1
|
2 pieces 11x87 10x9 mm; Bronchopneumonia in ~40% and interstitial fibrosis in ~60%
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0526 |
Heart
|
PAXgene |
1
|
2 pieces 13x7 & 10x10 mm; no adipose
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0626 |
Stomach
|
PAXgene |
1
|
6 pieces up to 10x4.8 mm; 3 have antral (not body) mucosa with mild chronic gastritis; 3 are only muscularis
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0726 |
Fallopian tube
|
PAXgene |
0
|
2 pieces 13x4 & 9x4 mm; 1 piece has 60% fibrofatty vascularized stroma; smaller piece has 30% adipose
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0826 |
Uterus
|
PAXgene |
0
|
2 pieces 8x7 mm; all myometrium, no endometrium
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0926 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces up to 8x3.5 mm; all have mucosa and abundant submucosal glands
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 7x4 mm; 1 has a 2.8 mm circular focus of fibrotic submucosa
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1126 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 10x5 mm; 3 have partially sloughed epithelium; 3 have only muscular wall
|
Acceptable
|
 |