|
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-1826 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with minimal lymphoid tissue; specimens have full thickness of ileal wall
|
Unacceptable
|
 |
|
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2326 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; <1mm salivary gland; remainder is lip and connective tissue
|
Unacceptable
|
 |
|
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibrofatty tissue without mammary ducts
|
Acceptable
|
 |
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature fat, <10% fibrous tissue and nerve
|
Acceptable
|
 |
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 1 is predominantly fat with smaller component of stroma/ducts, 2nd is mostly dense stroma with scattered ducts and ~20% fat
|
Acceptable
|
 |
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5-10% fascia/vascular elements, rep delineated
|
Acceptable
|
 |
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, mild nodular goitrous features. ~20% adherent fibrous tissue, rep delineated
|
Acceptable
|
 |
|
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-0926 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibrocystic changes; lobular/ductal elements present, rep delineated
|
Acceptable
|
 |
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-0126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; <5% fibrous content
|
Acceptable
|
 |
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; lobular and ductal elements in predominantly fibrous stroma; 10% fat content
|
Acceptable
|
 |
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-1726 |
Heart
|
PAXgene |
1
|
2 pieces; scattered enlarged myofibers; slight increase of interstitial fibrous tissue
|
Acceptable
|
 |
|
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 5 & 10% fibrous content
|
Acceptable
|
 |
|
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-1826 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; fibroadipose tissue with mammary ducts
|
Acceptable
|
 |
|
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-2426 |
Stomach
|
PAXgene |
3
|
6 pieces; tissue totally autolyzed
|
Unacceptable
|
 |
|
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-2526 |
Ileum
|
PAXgene |
1
|
6 pieces; thin band [0.2mm] of lymphoid tissue along autolyzed mucosal edge of several samples; muscularis propria present; LCM
|
Unacceptable
|
 |
|
GTEX-1M4P7
|
61-70
|
Male
|
GTEX-1M4P7-0326 |
Adipose tissue
|
PAXgene |
0
|
3 pieces, ~25-30% fat, mainly fascia/vascular elements
|
Unacceptable
|
 |
|
GTEX-1M4P7
|
61-70
|
Male
|
GTEX-1M4P7-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements only
|
Acceptable
|
 |
|
GTEX-1M5QR
|
41-50
|
Male
|
GTEX-1M5QR-0426 |
Omentum
|
PAXgene |
1
|
2 pieces; mature adipose tissue, small (<10%) component of nerve and vessels
|
Acceptable
|
 |
|
GTEX-1M5QR
|
41-50
|
Male
|
GTEX-1M5QR-2126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; fragmented, mature fat with <10% stroma/small vessels
|
Acceptable
|
 |
|
GTEX-1M5QR
|
41-50
|
Male
|
GTEX-1M5QR-2526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; gynecomastia
|
Acceptable
|
 |
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0726 |
Ileum
|
PAXgene |
1
|
6 pieces, well-defined lymphoid aggregates delineated, ~20% of tissue
|
Acceptable
|
 |
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~target muscularis delineated, ~50% of tissue, rest is 'contaminant' serosa/mucosa
|
Acceptable
|
 |
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target muscularis (delineated) is ~60% of tissue, rest is 'contaminant' mucosa/serosa
|
Acceptable
|
 |
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1026 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibrous mastopathy. Rare atrophic duct/lobular units, rep delineated
|
Acceptable
|
 |
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1926 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5% fascia/vascular elements
|
Acceptable
|
 |