GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1226 |
Omentum
|
PAXgene |
1
|
2 pieces ~8x7mm
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1326 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, ~9x2mm. Muscularis and fat, presumed sigmoid aliquots 1525 below
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~10x3mm. Mucosa variably but moderately preserved, ~10-15% of thickness
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1526 |
Ileum
|
PAXgene |
2
|
6 pieces ~9x2.5mm. Small bowel mucosa (delineated) with scattered lymphoid aggregates, encircled. Should be relabled as ileum, presumed switch with 1325 above
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1626 |
Prostate
|
PAXgene |
1
|
2 pieces, diffuse glandular hyperplasia. Large adherent 6mm fatty nubbin attached to one aliquot, encircled/delineated
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1726 |
Liver
|
PAXgene |
1
|
2 pieces, ~9x9mm. Diffuse macrovesicular steatosis involves 90+ % of specimens, which are well - preserved
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1826 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces ~10x10mm. Essentially all fat; a few trace ductal units noted, encircled
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces ~8x2.5mm. Squamous epithelium is ~2-3% of thickness; abundant adnexal structures (hair, sebaceous glands, a few epidermal inclusion cysts) are present, representative ones encircled
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2026 |
Testis
|
PAXgene |
0
|
2 pieces, ~9x7mm. Spermatogenesis present
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2126 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~7x2mm. Up to ~1mm layer of fat on dermal surface of several, delineated. Squamous mucosa is ~2-3% of thickness
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~11x8 mm.
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~12x7mm. Minimal interstitial fat, excellent specimens.
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~4mm d. 1-2mm adherent fat present on one, delineated. Nerve tissue encircled
|
Acceptable
|
 |
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~1mm d. encircled; 75% of both aliquots (overall ~4x2mm) are attached vein and adipose tissue
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 8x5 & 10x7mm; Good red and white pulp
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x2 & 3x2mm; Occlusive fibrocalcific plaque. 40% extraneous adipose.
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 8x5 & 13x6mm; No extraneous tissue.
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0426 |
Heart
|
PAXgene |
1
|
2 pieces, 9x8 & 10x9mm; No extraneous tissue.
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 10x6 & 11x7mm; No extraneous tissue.
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0626 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 10x2mm; No plaques. No extraneous tissue.
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0726 |
Lung
|
PAXgene |
1
|
2 pieces, 7.5x5 & 10x7mm; Vascular sclerosis, focal emphysema and fibrosis; focus of aspiration pneumonia
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces, 11x7 & 8x8mm; 10% adipose in one, none in the other; many islets
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 7x2mm; Well sampled mucosa.
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 10x6mm; Well sampled muscularis propria
|
Acceptable
|
 |
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1126 |
Omentum
|
PAXgene |
1
|
2 pieces, 10x6 & 8x5.5mm; Artefactual fractures.
|
Acceptable
|
 |