GTEX-147F4
|
41-50
|
Male
|
GTEX-147F4-2226 |
Ileum
|
PAXgene |
2
|
6 pieces, glandular mucosa autolyzed; lymphoid aggregates are ~30% residual, rep delineated
|
Unacceptable
|
|
GTEX-147GR
|
61-70
|
Male
|
GTEX-147GR-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; no lymphoid nodules; autolyzed mucosa
|
Unacceptable
|
|
GTEX-147JS
|
61-70
|
Male
|
GTEX-147JS-2726 |
Ileum
|
PAXgene |
3
|
4 pieces, glandular mucosa autolyzed; residual lymphoid aggregates are ~~20% of tissue
|
Acceptable
|
|
GTEX-148VJ
|
61-70
|
Male
|
GTEX-148VJ-2226 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular mucosal elements sloughed; residual lymphoid aggregates are ~20%
|
Acceptable
|
|
GTEX-1497J
|
61-70
|
Male
|
GTEX-1497J-1926 |
Ileum
|
PAXgene |
2
|
6 pieces, glandular elements of mucosa completely sloughed; residual lymphoid aggregates are ~25% residual tissue, rep delineated
|
Acceptable
|
|
GTEX-14A5H
|
61-70
|
Male
|
GTEX-14A5H-1526 |
Ileum
|
PAXgene |
3
|
6 pieces, totally autolyzed, minimal residual lymphoid elements
|
Unacceptable
|
|
GTEX-14A5I
|
51-60
|
Female
|
GTEX-14A5I-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, glandular mucosa totally autolyzed, ~20% residuum is lymphoid aggregates
|
Acceptable
|
|
GTEX-14A6H
|
21-40
|
Male
|
GTEX-14A6H-1726 |
Ileum
|
PAXgene |
1
|
3 pieces; muscularis, fat, no lymphoid tissue
|
Unacceptable
|
|
GTEX-14ABY
|
51-60
|
Male
|
GTEX-14ABY-2226 |
Ileum
|
PAXgene |
3
|
6 pieces; autolysed mucosa with poorly outlined lymphoid nodules (marked); some lymphoid tissue preserved; LCM
|
Acceptable
|
|
GTEX-14AS3
|
41-50
|
Female
|
GTEX-14AS3-1226 |
Ileum
|
PAXgene |
2
|
5 pieces; mucosa with good lymphoid component in 2 of 5 pieces
|
Acceptable
|
|
GTEX-14ASI
|
61-70
|
Male
|
GTEX-14ASI-2526 |
Ileum
|
PAXgene |
3
|
6 fragmented pieces; lymphoid tissue autolyzed
|
Unacceptable
|
|
GTEX-14B4R
|
21-40
|
Male
|
GTEX-14B4R-1126 |
Ileum
|
PAXgene |
0
|
6 pieces; predominantly muscularis with incomplete strips of mucosa, no lymphoid tissue
|
Unacceptable
|
|
GTEX-14BIL
|
51-60
|
Male
|
GTEX-14BIL-2826 |
Ileum
|
PAXgene |
3
|
6 pieces; too little intact lymphoid tissue
|
Unacceptable
|
|
GTEX-14BIM
|
61-70
|
Female
|
GTEX-14BIM-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, target mucosa; glandular elements autolyzed, insufficient target lymphoid aggregate to warrant analysis
|
Unacceptable
|
|
GTEX-14BIN
|
51-60
|
Female
|
GTEX-14BIN-2926 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed tissue with 2 very small (0.4mm) lymphoid nodules
|
Unacceptable
|
|
GTEX-14BMU
|
21-40
|
Female
|
GTEX-14BMU-1426 |
Ileum
|
PAXgene |
1
|
6 pieces, excellent specimen, ~50-60% lymphoid aggregates
|
Acceptable
|
|
GTEX-14BMV
|
51-60
|
Male
|
GTEX-14BMV-2626 |
Ileum
|
PAXgene |
3
|
2 pieces; completely autolyzed mucosa with too little lymphoid tissue
|
Unacceptable
|
|
GTEX-14C38
|
41-50
|
Male
|
GTEX-14C38-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa autolyzed, correct target but too little lymphoid tissue for analysis
|
Unacceptable
|
|
GTEX-14C39
|
41-50
|
Male
|
GTEX-14C39-1826 |
Ileum
|
PAXgene |
1
|
6 pieces, glandular mucosa autolyzed but residual target lymphoid aggregates are ~40% of tissue, rep delineated
|
Acceptable
|
|
GTEX-14C5O
|
61-70
|
Male
|
GTEX-14C5O-2726 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed
|
Unacceptable
|
|
GTEX-14DAQ
|
61-70
|
Female
|
GTEX-14DAQ-2626 |
Ileum
|
PAXgene |
2
|
4 pieces, glandular mucosa completely autolyzed; residual lymphoid aggregates are ~30% tissue
|
Acceptable
|
|
GTEX-14DAR
|
41-50
|
Male
|
GTEX-14DAR-1426 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved; lymphoid aggregates delineated, ~20% tissue
|
Acceptable
|
|
GTEX-14E1K
|
51-60
|
Male
|
GTEX-14E1K-1326 |
Ileum
|
PAXgene |
3
|
6 pieces, mainly muscularis, trace autolyzed mucosa, insufficient lymphoid aggregate for analysis
|
Unacceptable
|
|
GTEX-14E6C
|
41-50
|
Male
|
GTEX-14E6C-2326 |
Ileum
|
PAXgene |
3
|
4 pieces; no lymphoid tissue
|
Unacceptable
|
|
GTEX-14E6D
|
51-60
|
Male
|
GTEX-14E6D-2126 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with no significant residual lymphoid aggregates
|
Unacceptable
|
|