GTEX-RTLS
|
61-70
|
Female
|
GTEX-RTLS-2526 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8x2.5 mm; epithelium totally sloughed
|
Acceptable
|
 |
GTEX-RTLS
|
61-70
|
Female
|
GTEX-RTLS-2626 |
Stomach
|
PAXgene |
2
|
6 pieces up to 7x2 mm; mucosa moderately autolyzed
|
Acceptable
|
 |
GTEX-RTLS
|
61-70
|
Female
|
GTEX-RTLS-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2 mm; mucosa largely autolyzed; muscle mildly autolyzed
|
Acceptable
|
 |
GTEX-RTLS
|
61-70
|
Female
|
GTEX-RTLS-2826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 8x6 & 7x7 mm; atrophic, ducts no lobules; 40 & 60% adipose
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0126 |
Lung
|
PAXgene |
1
|
2 pieces, 8x6 & 6x6; several dilated air spaces
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 11x5 & 9x7 mm;
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0326 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces up to 6x4 mm; excellent specimen
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0426 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces up to 7x3 mm;
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0526 |
Stomach
|
PAXgene |
1
|
6 pieces up to 8x5 mm; well preserved oxyntic mucosa with slight surface sloughing
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 11x10 & 10x10 mm; 50 & 70% adipose tissue; abundant lobular and ductal components; unfixed central areas in adipose tissue
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0726 |
Urinary bladder
|
PAXgene |
1
|
6 pieces up to 8x5 mm; surface focally present in 5 of 6 pieces (maximum length 3.7 mm)
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0826 |
Ovary
|
PAXgene |
1
|
2 pieces, 10x8 & 9x8 mm; numerous ova and follicles present
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0926 |
Fallopian tube
|
PAXgene |
0
|
2 pieces, 9x5 & 7x4 mm; tube comprises ~20-30% of specimens
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1026 |
Uterus
|
PAXgene |
1
|
2 pieces, 10x9 & 9x8 mm; no glands present
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1126 |
Cervix - endocervix
|
PAXgene |
0
|
2 pieces, 7x7 & 7x6 mm; 1 piece is endocervix; other has no epithelium
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1226 |
Cervix - endocervix
|
PAXgene |
0
|
2 pieces, 9x6 & 8x7 mm; 1 piece with squamous high grade dysplasia (11 mm in length); 1 piece without epithelium;
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 7.6x8.7 mm; surface partially sloughed
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1426 |
Vagina
|
PAXgene |
0
|
6 pieces up to 9x5 mm; excellent preservation
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1526 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x3.4 mm;
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 15x12 & 10x8 mm; large central defects especially in larger piece
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 11x9 & 9x6 mm; minimal adipose interspersed
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1826 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces ~1.6 mm in diameter; 60 & 40% adjacent adipose and fibrous stroma
|
Acceptable
|
 |
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces 2 mm in diameter; normal arteries minimal adipose tissue
|
Acceptable
|
 |
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-0126 |
Thyroid gland
|
PAXgene |
1
|
2 aliquots, ~8x5mm.
|
Acceptable
|
 |
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-0226 |
Coronary artery
|
PAXgene |
1
|
2 aliquots, ~2x1mm. LDACC NOTE: large adherent aggegates of fat (1-2mm) surround both
|
Acceptable
|
 |