GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1126 |
Omentum
|
PAXgene |
1
|
2 pieces; some central defects; incidental 3.8mm lymph node
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1226 |
Pancreas
|
PAXgene |
2
|
2 pieces; both include mostly attached fat up to ~20%, some intralobular fibrosis and circumscribed area of atrophy, fibrosis, and mucinous metaplpasia of small duct branches
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; includes up to ~10% fat, hair bearing skin
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1426 |
Mammary tissue (breast)
|
PAXgene |
1
|
3 pieces (fragmented); lesser component of fat with dense stroma with scattered dilated ducts consistent with gynecomastia
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1526 |
Prostate
|
PAXgene |
1
|
2 pieces; fibromuscular stroma admixed with glands, small portion of seminal vesicle on one piece
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1626 |
Testis
|
PAXgene |
1
|
2 pieces; diffuse tubular hyalinization with plentiful residual Leydig cells, consistent with Klinefelter syndrome; includes significant contaminating component of fat/vessels and rete testis
|
Unacceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections of ileum, no lymphoid tissue
|
Unacceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; colon/cecum, not ileum
|
Unacceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; full thickness colon
|
Unacceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-2026 |
Skin, leg
|
PAXgene |
1
|
6 pieces; variable component of fat, mostly attached, up to 10%, epidermis measures 36 microns
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-2126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; mature fat with small component of nerve/vessels
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-2226 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; incomplete sections, skeletal muscle with ~5% attached fat
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-2326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; vessels and fat, not nerve
|
Unacceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-2426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; fragments of vessel wall with significant medial calcification and attachment of fat (30-50%) and vessels
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0126 |
Spleen
|
PAXgene |
1
|
2 partially fragmented pieces; up to 0.28mm artefactual outer rim possibly due to drying or incorrect fixation;
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0226 |
Omentum
|
PAXgene |
1
|
2 pieces, 1 fragmented
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0326 |
Pancreas
|
PAXgene |
1
|
2 pieces plus a separate piece of fat; larger piece has up to 3mm external fat
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0426 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; cortex with up to 3mm external adherent fat
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 1 with up to 2.3mm adherent skeletal muscle [labeled]
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0626 |
Aorta
|
PAXgene |
1
|
6 pieces; fibrous intimal plaques of variable thickness
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibrofatty tissue without mammary ducts
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0826 |
Prostate
|
PAXgene |
1
|
2 pieces; 1 piece contains stroma and muscle without prostatic tissue [labeled]
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; 5 with submucosal mucous glands; 1 with periductal chronic inflammatory cells [labeled]
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; variable amounts of fibrofatty external stroma
|
Acceptable
|
|