GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-2026 |
Artery - tibial
|
PAXgene |
1
|
2 arteries 3.2&2.7 mm; folded, polypoid intima
|
Acceptable
|
 |
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-2126 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 2.4x1.3 & 2.6x2 mm; 1 has 30% adipose and 40% edematous stroma; other has <10% adipose
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0126 |
Spleen
|
PAXgene |
2
|
2 8x6mm aliquots
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0226 |
Pancreas
|
PAXgene |
1
|
2 ~7x6mm aliquots, good clean specimens with no peripancreatic fat; ~5% interstitial fat/fibrous tissue
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0326 |
Aorta
|
PAXgene |
0
|
6 ~10x1.5mm pieces, a few with adherent layer of ~0.5mm fibrous tissue on serosal edges
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0426 |
Esophagus - mucosa
|
PAXgene |
0
|
6 ~5x4mm pieces. Non keratinizing squamous mucosa is ~10-20% of thickness
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0526 |
Esophagus - muscularis
|
PAXgene |
0
|
6 ~6x4mm pieces
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0626 |
Stomach
|
PAXgene |
1
|
6 ~6x4mm pieces; mucosa well-preserved, ~25% of thickness in most pieces
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0726 |
Thyroid gland
|
PAXgene |
0
|
2 ~9x8mm aliquots, one with ~1.5mm layer of peripheral fat along one edge
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0826 |
Colon, transverse
|
PAXgene |
1
|
6 ~7.5x3mm pieces; mucosa well-preserved, ~15-40% of thickness
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0926 |
Urinary bladder
|
PAXgene |
1
|
6 8x4.5mm pieces. Urothelium reasonably well-preserved, 1-2% of thickness.
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-1026 |
Prostate
|
PAXgene |
1
|
2 ~9.5x7mm aliquots. Glands well-preserved
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-1126 |
Testis
|
PAXgene |
1
|
2 7x6mm aliquots. Robust spermatogenesis
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-1226 |
Skin, leg
|
PAXgene |
0
|
6 ~8x2.5mm pieces. Squamous epithelium is ~2% of thickness
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-1326 |
Adipose tissue
|
PAXgene |
0
|
2 ~14x10mm aliquots, centrally under-fixed with tears/holes
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-1426 |
Muscle, skeletal
|
PAXgene |
0
|
2 ~11x8mm aliquots, minimal (<5%) interstitial fat
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-1526 |
Nerve - tibial
|
PAXgene |
0
|
2 ~4.5x3mm aliquots, good clean specimens
|
Acceptable
|
 |
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-1626 |
Artery - tibial
|
PAXgene |
0
|
2 ~3mm d aliquots, one with extra 2mm artery segment attached. Good clean specimen
|
Acceptable
|
 |
GTEX-QV44
|
51-60
|
Male
|
GTEX-QV44-0126 |
Spleen
|
PAXgene |
1
|
2 pieces both 6.5x7 mm; little congestion
|
Acceptable
|
 |
GTEX-QV44
|
51-60
|
Male
|
GTEX-QV44-0225 |
Adrenal glands
|
PAXgene |
1
|
2 pieces up to 9.9x3 mm; cortex and medulla 50% & 20% adipose; should have been be labeled 225
|
Acceptable
|
 |
GTEX-QV44
|
51-60
|
Male
|
GTEX-QV44-0326 |
Liver
|
PAXgene |
1
|
2 pieces 10x7&8x6.7 mm; good preservation, no lesions
|
Acceptable
|
 |
GTEX-QV44
|
51-60
|
Male
|
GTEX-QV44-0426 |
Pancreas
|
PAXgene |
1
|
2 pieces 9.7x7 & 8.5x8.3 mm; good preservation; islets ~250 um; ~10% adipose
|
Acceptable
|
 |
GTEX-QV44
|
51-60
|
Male
|
GTEX-QV44-0526 |
Heart
|
PAXgene |
1
|
2 pieces 8x6.8 mm; early ischemic changes; <5% embedded fat
|
Acceptable
|
 |
GTEX-QV44
|
51-60
|
Male
|
GTEX-QV44-0626 |
Aorta
|
PAXgene |
1
|
6 pieces up to 8x2 mm
|
Acceptable
|
 |
GTEX-QV44
|
51-60
|
Male
|
GTEX-QV44-0726 |
Coronary artery
|
PAXgene |
1
|
2 arteries up to 2.8 mm; with calcified plaques and >50% occlusion
|
Acceptable
|
 |