|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0726 |
Stomach
|
PAXgene |
1
|
6 pieces ~8x4mm, mucosa well preserved, 20-40% of thickness
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0826 |
Colon, transverse
|
PAXgene |
0
|
6 pieces, ~7x4mm fragmented/detached msucosa but fairly well preserved, up to 10% thickness
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-0926 |
Urinary bladder
|
PAXgene |
2
|
6 pieces ~10x5mm, urothelium largely sloughed, where present less than 1% of thickness
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1026 |
Fallopian tube
|
PAXgene |
1
|
6 pieces ~3.5mm d, mucosa reasonably well perserved
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1126 |
Ovary
|
PAXgene |
1
|
2 pieces ~12x5 , post menopausal appearance, minute (~0.1mm) transitional cell islets noted, ? incipient Brenner tumors
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1226 |
Vagina
|
PAXgene |
1
|
6 pieces ~7x3mm, squmaous mucosa reasonably well preserved, ~5-10% of thickness
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1326 |
Cervix - ectocervix
|
PAXgene |
1
|
4 pieces ~10x4mm ecto and endocervcial mucosa both (transition zone), prominentn Nabothian cysts in one, en squared. Where present, squamous mucosa is 5-10% of thickness
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1426 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces ~10x6mm a few foci of endocervical glands well preserved, encircled, up to ~1.5mm d.
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1526 |
Uterus
|
PAXgene |
1
|
2 pieces ~10x7mm, Scanty proliferative pattern endometrium, reasonably well preserved, up to 2 mm thick on edge of alqiuot
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1626 |
Skin, leg
|
PAXgene |
0
|
6 pieces, ~7x2.5mm, squamous epithelium is ~3-5% of thickness
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1726 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~15x9mm
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1826 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~9x9mm, minmal interstital fat
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-1926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~4.5mm d generally clean specimen, trace adherent fat/fibrous tissue
|
Acceptable
|
 |
|
GTEX-T6MO
|
21-40
|
Female
|
GTEX-T6MO-2026 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~6mm d. some interstital fat and focal adherent fat, up to 1mm thick
|
Acceptable
|
 |
|
GTEX-T8EM
|
41-50
|
Male
|
GTEX-T8EM-0326 |
Lung
|
PAXgene |
1
|
2 pieces, 8x7mm
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, ~12x6mm. Focal lymphocytic thyroiditis (encircled), not diffuse enough to be Hashimoto's
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0226 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces ~12x6mm. No visible ductal elements, fibro-adipose tissues only.
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~8x2.5mm. Squamous mucosa is ~10-20% of thickness; occasional sub-mucosal glands noted, encircled. Focal chronic inflammation ensquared.
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~8x3mm
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0526 |
Stomach
|
PAXgene |
1
|
6 pieces, ~10x4mm. Mucosa well- preserved, ~20-25% of thickness. Surface hemorrhage/erosions ? etiology.
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~9x3mm. Mucosa remarkably well-preserved, ~10% of thickness
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0726 |
Urinary bladder
|
PAXgene |
2
|
5 pieces fragmented, ~8x4mm. Urothelium partly sloughed but better preserved than typical, <1% of thickness
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0926 |
Testis
|
PAXgene |
1
|
2 pieces ~8x8mm. Better preserved than usual, spermatogenesis present but appears slightly reduced
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-1026 |
Skin, leg
|
PAXgene |
0
|
6 pieces, ~6x2.5mm. Squamous epithelium is ~2-3% of thickness.
|
Acceptable
|
 |
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-1126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~10x5mm
|
Acceptable
|
 |