GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-1426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces ~3x1.5, & 2x2 mm; embedded in ~30% stroma & fat
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-1526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces ~3x2 mm; 2 arteries and 1 vein; tissue tears (histologic); embedded in ~40% stroma
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-1626 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, ~6x2.5 mm; numerous red cell casts
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-1726 |
Kidney - cortex
|
PAXgene |
1
|
2 pieces ~7.5x6 mm; cortex, not medulla, except for 10% of 1 piece; numerous red cell casts
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0126 |
Adipose tissue
|
PAXgene |
1
|
2 ~14x12mm aliquots, central separation/under fixation.
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~11x8mm aliquots, all adipose + fibrous tissue, no mammary ductal elements
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0326 |
Aorta
|
PAXgene |
2
|
6 ~9x1.5mm pieces, most with a 0.5mm layer of peri-aortic fat
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0426 |
Liver
|
PAXgene |
2
|
2 ~9x7mm aliquots. End-stage cirrhosis with marked bile stasis + steatosis.
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0526 |
Esophagus - mucosa
|
PAXgene |
2
|
6 ~4x2mm pieces, only trace mucosa, less than 5% of thickness
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~7.5x2mm pieces.
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0726 |
Stomach
|
PAXgene |
3
|
6 ~ 8x2.5mm pieces, epithelial component of mucosa completely autolyzed
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0826 |
Adrenal glands
|
PAXgene |
2
|
2 ~12x10mm aliquots. ~40% peripheral fat
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0926 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~ 11x8mm pieces. Interstitial fat <5% of specimens
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1026 |
Nerve - tibial
|
PAXgene |
1
|
2 ~7x4mm aliquots, fairly clean
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1126 |
Prostate
|
PAXgene |
3
|
2 ~9x7.5mm aliquots; glandular mucosa badly autolyzed
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1226 |
Thyroid gland
|
PAXgene |
1
|
2 ~12x7mm aliquots. Scattered colloid cysts
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1326 |
Brain - cerebellum
|
PAXgene |
2
|
4 ~6x5mm aliquots
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1426 |
Brain - cortex
|
PAXgene |
1
|
4 ~6x4mm aliquots
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1526 |
Pituitary gland
|
PAXgene |
1
|
1 ~8x6mm aliquot. Nice example with both adenohypophysis (6x6mm) and neurohypophysis (~5x2mm)
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1726 |
Skin, leg
|
PAXgene |
1
|
6 ~8.5x3mm pieces; squamous epithelium is ~1-2% of thickness.
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1826 |
Artery - tibial
|
PAXgene |
1
|
2 3x1mm aliquots, surrounded in to or part by up to 2mm rim of fat, small vessels & connective tissue
|
Unacceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1926 |
Lung
|
PAXgene |
3
|
2 ~10x7mm aliquots, patchy dense congestion. Bronchiolar lining badly sloughing
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2026 |
Coronary artery
|
PAXgene |
1
|
2 ~2mm artery. Dense calcification. Note: aliquots surrounded by up to2.5-5mm layer of fat (60% of total aliquot)
|
Unacceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2126 |
Heart
|
PAXgene |
1
|
2 ~9x7mm aliquots, patchy ischemic changes (contraction bands) noted. 8.5x1.5mm layer of fat along edge of one aliquot
|
Acceptable
|
 |
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2226 |
Spleen
|
PAXgene |
3
|
2 ~9x8mm aliquots
|
Acceptable
|
 |