|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0526 |
Aorta
|
PAXgene |
1
|
6 pieces, ~8x1mm, no visible atherosclerosis.
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0626 |
Urinary bladder
|
PAXgene |
2
|
6 pieces, ~ 6x4mm, urothelium partly sloughed, <2% of thickness when present
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0726 |
Cervix - ectocervix
|
PAXgene |
1
|
6 pieces, ~ 8x6mm both endo and ectocervial mucosa, well preserved, representative endocervical glands encircled
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0826 |
Cervix - endocervix
|
PAXgene |
1
|
6 pieces, ~8x5mm, no glands
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0926 |
Stomach
|
PAXgene |
1
|
6 pieces, ~8x3mm mucosa well preserved, ~30-40% thickness
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1026 |
Urinary bladder
|
PAXgene |
2
|
6 pieces mucosa, ~ 6x3mm sloughed mucosa: not vagina but additional bladder. May be used as such when relabled
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces `9x3mm, partially detached mucosa, `10% of thickness
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces ~8x6mm, focal areas of active Hashimoto's thyroiditis, areas of fibrous regression and scarring
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, ~5x2.5mm, squamous mucosa is ~5-10% thickness
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, ~ 7x2.5mm
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1526 |
Uterus
|
PAXgene |
1
|
2 pieces, ~ 8x7mm, one with layer of proliferative endometrium along one edge, well- preserved
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1626 |
Skin, leg
|
PAXgene |
0
|
6 pieces, ~ 7.5x3mm, squamous epithelium is ~2-3% of thickness
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1726 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~ 10x7mm
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1826 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~7x7mm, minimal interstital fat
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1926 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, ~ 5.5mm, partial rim of adherent fat on one, ~0.8mm
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 10x7mm, representative TDLUs encircled
|
Acceptable
|
 |
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-2126 |
Artery - tibial
|
PAXgene |
0
|
2 pieces 3mm, good clean specimens. One addtional small fragment
|
Acceptable
|
 |
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x5mm; thin layer of subcutaneous adipose
|
Acceptable
|
 |
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 9x6 & 9x8 mm; few central artifacts
|
Acceptable
|
 |
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 5x4 & 5x3 mm; ~30% adipose amongst nerve bundles
|
Acceptable
|
 |
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces ~2mm arteries & smaller branches; ~20% adipose amongst one aliquot
|
Acceptable
|
 |
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 8x6 & 8x7 mm; one has ~10% embedded adipose
|
Acceptable
|
 |
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 7x6 & 7x5 mm; minimal extraneous adipose
|
Acceptable
|
 |
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 12x8 & 12x5 mm; mammary ducts present; adipose comprises 70 to 90% of aliquots
|
Acceptable
|
 |
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-0826 |
Lung
|
PAXgene |
1
|
2 pieces 11x6 & 10x8 mm; heart failure cells
|
Acceptable
|
 |