GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0826 |
Stomach
|
PAXgene |
1
|
6 ~8x3mm pieces; mucosa generally well preserved, ~20-25% of thickness
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~7x2mm pieces with squamous mucosa ~10% of thickness
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~8x2.5mm pieces
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1126 |
Colon, transverse
|
PAXgene |
1
|
6 ~8.5x3mm pieces; mucosa is generally well-preserved, ~ 10% of thickness
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1226 |
Urinary bladder
|
PAXgene |
1
|
6 ~8.5x4mm pieces; Urothelium variably sloughed, <1% of thickness
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1326 |
Prostate
|
PAXgene |
1
|
2 ~11x8.5mm aliquots. Diffuse cystic glandular atrophy and patchy chronic prostatits
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1426 |
Testis
|
PAXgene |
1
|
2 ~11x9mm aliquots. Spermatogenesis is present but appears reduced
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1526 |
Adipose tissue
|
PAXgene |
1
|
2 ~11x8m aliquots
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1626 |
Skin, leg
|
PAXgene |
1
|
6 ~6.5x2.5mm pieces; squamous epithelium is ~1-2% of thickness
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1726 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~11x6mm aliquots, <5-10% interstitial fat
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1826 |
Nerve - tibial
|
PAXgene |
1
|
2 ~6x4mm aliquots, ~10% interstitial fat
|
Acceptable
|
 |
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1926 |
Artery - tibial
|
PAXgene |
1
|
2 ~2x1mm aliquots, substantial rims of fat/fibrous tissue around both (up to 1-2mm).
Focal Monckeberg’s medial sclerosis noted
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0126 |
Spleen
|
PAXgene |
1
|
2 pieces ~8x7 mm; not congested
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0226 |
Adrenal glands
|
PAXgene |
1
|
2 pieces 9.8x2.6 & 9x1.7 mm; mostly cortex; minimal adipose
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0326 |
Pancreas
|
PAXgene |
1
|
2 pieces 11.9x8 & 9x9 mm; well formed islets ~230um; focal interstitial fibrosis; ~10% interstitial fat
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 8x3 mm; ~540um thick mucosa; muscularis propria on 4 pieces
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 6.7x2.8 mm’ 3 pieces with hyperplastic squamous epithelium, 2 with fundic-type glandular epithelium; 1 with glandular and squamous epi.; probable reflux changes; no intestinal metaplasia
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0626 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces up to 8.7x4.3 mm
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0726 |
Stomach
|
PAXgene |
1
|
6 pieces up to 7x2 mm; good oxyntic mucosa on all, up to 0.8 mm; foveolar surface largely sloughed
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0826 |
Urinary bladder
|
PAXgene |
1
|
6 pieces up to 7 x2.7 mm; good mucosa; muscle in one piece; edematous stroma
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0926 |
Prostate
|
PAXgene |
1
|
2 pieces ~9x9mm each; no significant hyperplasia
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-1026 |
Testis
|
PAXgene |
1
|
2 pieces 14x7 & 9x12 mm; spermatogenesis present
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-1126 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 9x3 mm; epidermis 66um thick
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-1226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces ~12x7 & 9x9 mm; up to 10% centrally empty (unfixed or fractured)
|
Acceptable
|
 |
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-1326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces: 15x11 & 9.5x9.5 mm; ~5% internal fat
|
Acceptable
|
 |