GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2126 |
Stomach
|
PAXgene |
3
|
6 pieces up to 9.6x3.7 mm; severe mucosal hyperemia and superficial hemorrhages
|
Acceptable
|
 |
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 12x3.5 mm; mucosa very autolyzed, muscle slightly autolyzed(1); lymphoid cells preserved; submucosa very edematous
|
Acceptable
|
 |
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2326 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8.6x5; mucosa on all, but sloughed (3); muscle preserved (1)
|
Acceptable
|
 |
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2426 |
Prostate
|
PAXgene |
3
|
2 pieces 9x8 & 8x7 mm; glands autolyzed (3), stroma preserved (1)
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0126 |
Testis
|
PAXgene |
2
|
2 ~8.5x6mm aliquots. Spermatogenesis diffusely reduced/arrested
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0226 |
Skin, leg
|
PAXgene |
1
|
6 ~8x3mm pieces. Squamous epithelium is ~1-2% of thickness. ~1mm layer of subcutaneous fat present in 5 pieces
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0326 |
Adipose tissue
|
PAXgene |
1
|
2 ~9x9mm aliquots
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 ~6x5mm aliquots, ~10% interstitial/peripheral adipose tissue
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0526 |
Artery - tibial
|
PAXgene |
1
|
2 ~3mm d aliquots, clean specimens
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~11x6mm aliquot; <5% interstitial adipose tissue, clean specimens
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0726 |
Thyroid gland
|
PAXgene |
1
|
2 ~9.5x5.5mm aliquots. Adenomatoid nodules with regressive changes
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0826 |
Lung
|
PAXgene |
2
|
2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0926 |
Heart
|
PAXgene |
1
|
2 9x8mm aliquots, patchy interstitial fibrosis
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1026 |
Coronary artery
|
PAXgene |
1
|
2 ~3.5x2.5mm aliquots, one with partial ~0.5mm rim of fat. Minimal/no atherosclerotic deposition
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1126 |
Aorta
|
PAXgene |
1
|
6 ~9x1.5mm pieces. Minimal atherosis
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1226 |
Liver
|
PAXgene |
1
|
2 ~7.5x7.5mm aliquots, diffuse macrovesicular steatosis and chronic hepatitis with bridging fibrosis
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1326 |
Pancreas
|
PAXgene |
1
|
2 ~7x6.5mm aliquots, remarkably well preserved no saponification. One aliquot with 5x0.5mm adherent fat; otherwise clean specimens
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~6x1mm pieces; squamous mucosa is 15-40% of thickness
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~7x4mm pieces
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1626 |
Spleen
|
PAXgene |
2
|
2 ~ 7.5x7.0mm aliquots; red pulp especially poorly preserved
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1726 |
Stomach
|
PAXgene |
3
|
6 ~9x1.5mm pieces. Mucosa poorly preserved over-all, superficial portions sloughed and badly autolyzed-- ~20-30% of thickness
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1826 |
Urinary bladder
|
PAXgene |
2
|
6 ~8.5x4mm pieces. Urothelium is <1% of thickness, partly sloughed; some areas of cystitis cystica/ reactive changes
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1926 |
Colon, transverse
|
PAXgene |
2
|
6 ~ 9x3/5mm pieces. Mucosa generally well-preserved, some autolysis superficially, is ~10% of thickness
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-2026 |
Prostate
|
PAXgene |
1
|
2 ~9x6.5mm aliquots, patchy glandular hyperplasia and atrophy
|
Acceptable
|
 |
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~9.5x6.5mm aliquots. Ductal elements visible in both
|
Acceptable
|
 |