GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1426 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1526 |
Liver
|
PAXgene |
2
|
2 pieces; consistent with advanced alcoholic cirrhosis: steatosis, Mallory's hyaline, extensive fibrosis, marked cholestasis (rep outlined)
|
Unacceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1626 |
Stomach
|
PAXgene |
3
|
6 pieces; predominantly autolyzed mucosa
|
Unacceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1726 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; moderate to severe autolysis; largely sloughed mucosa; thick-walled vessels in submucosa; congestion
|
Unacceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately to severely autolyzed adrenal cortex and medulla; 50% and 40% fat content
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-1926 |
Omentum
|
PAXgene |
1
|
2 pieces; large central defects (? poor fixation)
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; moderate to severe tubular autolysis (sloughed tubular epithelium) and tubular bile casts (rep outlined); diffuse membranoproliferative glomerulonephritis (mesangial cell proliferation and capillary wall thickening)- likely secondary
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2126 |
Prostate
|
PAXgene |
1
|
2 pieces; mild to moderate autolysis; well preserved fibromuscular stroma and glandular component with diffusely sloughed lining epithelium
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; dense fibrous stroma with embedded small ductal structures
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; essentially well trimmed target muscularis; attached one tiny fragment of autolyzed mucosa (outlined)
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; severly autolyzed colonic mucosa and mildly to moderately autolyzed muscularis
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2526 |
Ileum
|
PAXgene |
3
|
6 pieces; epithelium totally autolyzed and ~5% tissue is residual lymphoid aggregates (outlined), muscularis (not target) also present
|
Unacceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2626 |
Pituitary gland
|
PAXgene |
2
|
1 piece; 85% adenohypophysis and 15% neurohypophysis
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2726 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; meningeal coverage noted in 2 of 4 pieces (arrows); ensquared portion of cerebellum
|
Acceptable
|
|
GTEX-1H3VE
|
41-50
|
Male
|
GTEX-1H3VE-2826 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces; Purkinje cells present
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0126 |
Heart
|
PAXgene |
1
|
2 pieces; no scars or acute lesions
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 20% internal fat
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0326 |
Coronary artery
|
PAXgene |
1
|
2 pieces; moderate atheromatous plaques, but widely patent lumen; up to 0.4mm external fat
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0426 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed; 5-10% dermal fat
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 15% nerve and vascular content
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0626 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 10 & 20% internal & external fat
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0726 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; minimal plaque; well dissected, no fat
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0826 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; moderate focal atrophy
|
Acceptable
|
|
GTEX-1HBPH
|
41-50
|
Female
|
GTEX-1HBPH-0926 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; <5% extraneous vessels
|
Acceptable
|
|