GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-1826 |
Kidney - cortex
|
PAXgene |
2
|
2 ~8x7mm aliquots—renal cortex, not medulla
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-1926 |
Pancreas
|
PAXgene |
3
|
2 ~9x9mm aliquots, ~10% adherent fat with saponification
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2026 |
Stomach
|
PAXgene |
3
|
6 ~7.5x3mm pieces. Autolyzed mucosa is ~3-45% of thickness
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2126 |
Colon, transverse
|
PAXgene |
3
|
6 ~9x1.5mm pieces. Epithelium totally autolyzed; mucosal stroma is ~10-12% of thickness
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2226 |
Ovary
|
PAXgene |
2
|
2 9x8mm aliquots. Post-menopausal-appearing, remote corpora albicantia present
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2326 |
Fallopian tube
|
PAXgene |
2
|
2 ~6x3mm aliquots. Lumen is ~0.4.x0.3mm in the center of each
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2426 |
Uterus
|
PAXgene |
2
|
2 ~8.5x3mm aliquots. Autolyzed, atrophic endometrium is <10% of both.
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2526 |
Vagina
|
PAXgene |
2
|
6 ~7x3mm pieces; squamous mucosa, focally beginning to slough, is ~2-3% of thickness
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2626 |
Cervix - ectocervix
|
PAXgene |
2
|
4 ~6x4mm pieces, 2 with ~ 0.1mm edge of squamous mucosa, 2 with no significant mucosal surface noted.
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2726 |
Cervix - endocervix
|
PAXgene |
2
|
4 ~6x5mm pieces. Only one has a ~3x2mm focus of endocervical glands, partially autolyzed. One has a 3x0.1mm edge of squamous mucosa; the other two lack a mucosal surface.
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2826 |
Urinary bladder
|
PAXgene |
2
|
6 ~8x5mm pieces. Urotherlium nearly completely sloughed; muscularis/adipose tissue is >99% of sections
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2926 |
Brain - cortex
|
PAXgene |
1
|
4 ~6x4mm aliquots. Some have a ~ 0.1mm layer of adherent pia arachnoid
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-3026 |
Brain - cerebellum
|
PAXgene |
1
|
4 ~5x5mm aliquots
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-3126 |
Pituitary gland
|
PAXgene |
1
|
1 ~ 6x4mm aliquot
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0126 |
Testis
|
PAXgene |
2
|
2 pieces up to 8x5.6mm; spermatogenesis
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0226 |
Thyroid gland
|
PAXgene |
2
|
2 pieces 8.6x9.5; nodular hyperplasia and fibrosis
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, up to 10.7x5 with ducts; ~70% adipose
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0426 |
Heart
|
PAXgene |
1
|
2 pieces 7x7 mm; contraction bands
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces with 2.3 and 2mm vessels,; 60% adipose
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0626 |
Aorta
|
PAXgene |
1
|
6 pieces up to 8.5x2 mm
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
5 pieces up to 6x2.6mm; focal parakeratosis
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 8.7x4mm
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0926 |
Lung
|
PAXgene |
1
|
2 pieces, 8x8 & 9x9mm; no inflammation
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-1026 |
Spleen
|
PAXgene |
1
|
2 pieces, 10x5 & 7x6mm; not congested; low lymphoid content
|
Acceptable
|
 |
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-1126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces ~14x4 mm, cortex & medulla; 10% fat
|
Acceptable
|
 |