|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0826 |
Ovary
|
PAXgene |
1
|
2 pieces 8x5 & 7x6 mm; very little ovarian tissue, ~ 10%.
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0926 |
Fallopian tube
|
PAXgene |
0
|
2 pieces 8x3 & 6x5 mm; excellent preservation
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1026 |
Urinary bladder
|
PAXgene |
1
|
6 pieces up to 8x5 mm; only one piece has mucosa
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1126 |
Vagina
|
PAXgene |
0
|
6 pieces up to 8x4 mm; all with epithelium
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 6x3 mm; all are MUCOSA,
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 6x3 mm;3 are muscularis 3 are adventitia
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1426 |
Stomach
|
PAXgene |
1
|
6 pieces up to 8x5 mm; mucosa ~ 1mm. good preservation
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1526 |
Colon, transverse
|
PAXgene |
0
|
6 pieces up to 7x4 mm; mucosa ~0.4 mm; very good mucosal preservation in all 6 pieces
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1626 |
Skin, leg
|
PAXgene |
0
|
6 pieces up to 8x3 mm
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 9x7 & 9x5 mm
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1826 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 13x6 & 10x6 mm; minimal adipose
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1926 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 4x3 & 3x3 mm; <10% adipose
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-2026 |
Artery - tibial
|
PAXgene |
1
|
2 pieces 2 mm arteries with no abnormalities
|
Acceptable
|
 |
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 9x7 & 8x5 mm; fibrocystic changes; ~20 & 40% adipose admixed
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0126 |
Spleen
|
PAXgene |
1
|
2 pieces 6x6 & 7x4 mm; moderately congested
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0226 |
Coronary artery
|
PAXgene |
1
|
2 pieces 8x5 & 7x5 mm; eccentric plaques with wide lumens; 40% external adipose
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0326 |
Aorta
|
PAXgene |
1
|
6 pieces up to 8x2 mm; no plaques
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0426 |
Heart
|
PAXgene |
1
|
2pieces 9x6 & 8x7 mm; patchy fibrosis <10%(old infarcts)
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0526 |
Lung
|
PAXgene |
1
|
2 pieces 8x8 mm; no inflammation
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0626 |
Kidney - medulla
|
PAXgene |
2
|
6 pieces up to 10x6 mm; 3 are pure medulla, 3 are mixed medulla and cortex; cortex shows severe vascular lesions as in 0725; label medulla, consider it mixed
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0726 |
Kidney - cortex
|
PAXgene |
2
|
2 pieces 10x8 & 9x8 mm; cortex in both, 20% medulla in one; severe glomerular and vascular sclerosis; no normal glomeruli present; relabel as cortex
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0826 |
Adrenal glands
|
PAXgene |
1
|
2 pieces 12x6 & 9x6 mm; mostly cortex; >50% poorly fixed adipose; several large nerves in one piece, ~10%.
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0926 |
Pancreas
|
PAXgene |
1
|
2 pieces 11x8 & 8x8 mm; ~50 % adipose intermingled with parenchyma; islets present
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-1026 |
Urinary bladder
|
PAXgene |
1
|
6 pieces up to 9x4.8 mm; little mucosa sampled; mild chronic inflammation
|
Acceptable
|
 |
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-1126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 11x9 & 10x7 mm; microfollicular adenomatoid nodules
|
Acceptable
|
 |