|
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-2426 |
Prostate
|
PAXgene |
3
|
2 aliquots, ~9x7mm. Glandular component with near-total autolysis
|
Acceptable
|
 |
|
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-2526 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces, ~5x4mm. Granular layer poorly preserved
|
Acceptable
|
 |
|
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-2626 |
Brain - cortex
|
PAXgene |
2
|
4 pieces, ~5x4mm
|
Acceptable
|
 |
|
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-2726 |
Pituitary gland
|
PAXgene |
3
|
1 aliquot, ~8x7mm. Badly autolyzed
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, 6xx3mm. Squamous mucosa is ~2-3% of thickness.
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0226 |
Adipose tissue
|
PAXgene |
1
|
2 aliquots, ~8x6mm.
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0326 |
Testis
|
PAXgene |
2
|
2 aliquots, ~8x5mm. Spermatogenesis is noted
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 aliquots, ~4.5x3mm. Good clean specimens
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0526 |
Artery - tibial
|
PAXgene |
1
|
2 aliquoqts, ~2.5mm. Good clean speimens
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 aliquots, 6x5mm. ~10% interstitial fat, one aliquot
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0726 |
Thyroid gland
|
PAXgene |
1
|
2 aliquots, ~8x6mm
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 aliquots, ~8x8mm. No ductal elements noted.
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0926 |
Lung
|
PAXgene |
2
|
2 aliquots, 10x 7mm, foci of chronic inflammation--areas of emphysematous damage
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1026 |
Heart
|
PAXgene |
1
|
2 aliquots, ~9x7mm. Patchy interstitial fibrosis, micro-infarcts noted. LDACC NOTE: Ahdherent 5x2mm fatty nubbin on one, encircled
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1126 |
Coronary artery
|
PAXgene |
1
|
2 aliquots, ~2.5mm d. LDACC ALERT: one has adherent fat up to ~1.5mm, discontinuous aggregates
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1226 |
Aorta
|
PAXgene |
1
|
6 pieces, ~9x2mm
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1326 |
Liver
|
PAXgene |
2
|
2 aliquots, ~8x6mm. Diffuse macrovesicular steatosis involves ~70% of specimen
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1426 |
Spleen
|
PAXgene |
3
|
2 aliquots ~8x6mm. Congested.
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1526 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, 8x2mm. Mucosa totally slough save for a few minute foci, badly preserved. Prominent sub mucocal glands encircled
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1626 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, ~8x3mm
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1726 |
Pancreas
|
PAXgene |
3
|
2 aliquots, ~9x7mm. ~10% interstitial fat, marked saponification, poorly preserved
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1826 |
Adrenal glands
|
PAXgene |
3
|
2 aliquots ~12x6mm. LDACC NOTE: Adrenal cortex is only ~40% of both, 60% is fat in both, encircled
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, ~6.5x2.5mm . Tublules moderately--severely autolyzed.
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2026 |
Kidney - medulla
|
PAXgene |
2
|
2 aliquots, ~9x8mm. LDACC ALERT: Medulla is ~ 80% of one, ensquared; the other is all cortex
|
Acceptable
|
 |
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2126 |
Stomach
|
PAXgene |
2
|
6 pieces, 7x2.5mm. Mucosa is ~30-50% of thickness, poorly preserved
|
Acceptable
|
 |