GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-0926 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, ~ 7x4mm
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1026 |
Brain - cerebellum
|
PAXgene |
2
|
4 ~6x5mm pieces, granular layer more autolyzed
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1126 |
Fallopian tube
|
PAXgene |
1
|
2 pieces fibrovascular tissue, no tube is present
|
Unacceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1226 |
Pituitary gland
|
PAXgene |
2
|
A ~ 7x6.6 mm aliquot, with a 6.5x4.2 mm adenohypophysis and a ~3.2x2.5mm neurohypophysis/stalk fragment
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces of fibroadipose tissue, unknown provenance.
|
Unacceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1426 |
Vagina
|
PAXgene |
2
|
6 ~9x3mm pieces. Squamous mucosa has sloughed from ~50% of tissue; where present, is ~1% of thickness
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1526 |
Skin, leg
|
PAXgene |
1
|
6 ~8x1.5mm pieces. Squamous mucosa is 1.5-2% of thickness
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1626 |
Adipose tissue
|
PAXgene |
1
|
2 ~ 9x7mm aliquots, areas of poor/under-fixation centrally
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1726 |
Lung
|
PAXgene |
2
|
2 ~9.5x8mm aliquots; mild congestion, occasional prominent aggregates of hemosiderin-laden macrophages
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1826 |
Liver
|
PAXgene |
2
|
2 ~ 8x8mm aliquots, ? fibrosis; request Masson
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1926 |
Stomach
|
PAXgene |
3
|
3(epithelium); 1-2 (muscularis); 6 ~ 7x2mm pieces; mucosa near totally autolysis, ~25-30% of thickness
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2026 |
Pancreas
|
PAXgene |
2
|
2 ~8.5x8mm aliquots, extensive saponification of peripancreatic fat, ~25% of aliquots
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2126 |
Spleen
|
PAXgene |
2
|
2 ~8.5x6.5mm aliquots, areas of poor/under-fixation
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~8x3mm pieces. Clean specimens
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~7x0.75mm pieces. Squamous mucosa is ~10% of thickness.
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2426 |
Adrenal glands
|
PAXgene |
2
|
2 ~ 15x5mm aliquots, minute amounts of adherent fat
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2526 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~9x8mm aliquots, about 30% interspersed fat
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2626 |
Nerve - tibial
|
PAXgene |
2
|
2 aliquots, ~7x3mm, ~20% interspersed and adherent fat
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2726 |
Urinary bladder
|
PAXgene |
2
|
6 pieces, ~8x4mm. Urothelium completely sloughed, detrusor muscle only
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2826 |
Ovary
|
PAXgene |
1
|
2 ~12x7.5mm aliquots. Typical involuted/post-menopausal appearance; ~70% corpora albicantia
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2926 |
Cervix - ectocervix
|
PAXgene |
1
|
4 aliquots, ~6x5mm. No visible squamous mucosa
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-3026 |
Cervix - endocervix
|
PAXgene |
2
|
4 aliquots ~6x5mm. Mucosa badly autolyzed
|
Acceptable
|
 |
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-3126 |
Uterus
|
PAXgene |
2
|
2 ~ 8.5x7mm aliquots, few foci of completely autolyzed mucosa/adenomyosis; mainly myometrium
|
Acceptable
|
 |
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0126 |
Spleen
|
PAXgene |
2
|
2 ~10mmx10mm aliquots, central under-fixation with holes/tears
|
Acceptable
|
 |
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0226 |
Aorta
|
PAXgene |
1
|
6 pieces, ~ 7.5x1.5mm. Vasa vasorum well-demonstrated
|
Acceptable
|
 |