GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; up to 0.3mm external fat on one piece
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; 40-60% contaminating tissues, attached 3.2mm x 3.3mm portion of skeletal muscle on one piece, medial calcification (outlined), attached fat, vein, nerve, pacinian corpuscle
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-0526 |
Skin, leg
|
PAXgene |
1
|
6 pieces; up to 10% attached and internal fat; 41.67um thick epidermis
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-0626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, fragmented; less than 10% fibrovascular component
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-0726 |
Lung
|
PAXgene |
1
|
2 pieces; sloughing of bronchial epithelium; pleura covers one piece (outlined); congestion and atelectasis
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-0826 |
Esophagus - mucosa
|
PAXgene |
0
|
5 pieces; several clusters of submucosal glands; squamous epithelium measures up to 339.5um
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
5 pieces; mostly adipose and fibrovascular tissue with outlined minimal fragment of muscularis
|
Unacceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1026 |
Gastroesophageal junction
|
PAXgene |
0
|
7 pieces; inflamed mucosa (not target, esophageal and gastric)
|
Unacceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1126 |
Stomach
|
PAXgene |
1
|
6 pieces; well preserved gastric mucosa, focally acutely inflamed
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; adipose tissue with several large vessels
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1326 |
Pancreas
|
PAXgene |
1
|
2 pieces; relatively well preserved with islets well visualized; ~10% is septa with vessels, nerve, and adipose tissue
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1426 |
Uterus
|
PAXgene |
1
|
2 pieces; no endometrium in this section; myometrium and 5% to 40% vessels
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1526 |
Vagina
|
PAXgene |
1
|
6 pieces; epithelium is minimal to absent on three with significant skeletal muscle
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; predominantly dense fibrous stroma with scattered ducts and atrophic lobules (rep. outlined), microcalcifications
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1726 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; up to 50% external fat (subcutis)
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; colonic mucosa with few lymphoid nodules
|
Unacceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; fragments with variably autolyzed mucosa and muscularis
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-2126 |
Thyroid gland
|
PAXgene |
2
|
1 piece; includes attachment of skeletal muscle (outlined)
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed with minimal internal fat
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0226 |
Lung
|
PAXgene |
0
|
2 pieces; emphysematous change, several large vessels, bronchi and cartilage; focus of hemorrhage
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0326 |
Heart
|
PAXgene |
1
|
2 pieces; some interstitial fibrosis and myocyte hypertrophy
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0426 |
Omentum
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0526 |
Thyroid gland
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0626 |
Liver
|
PAXgene |
0
|
2 pieces; one piece includes capsule (target is 1cm below capsule), one includes larger vessel/duct (to be avoided)
|
Acceptable
|
|