GTEX-PSDG
|
41-50
|
Male
|
GTEX-PSDG-1626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~8x8 mm adipose pieces with <1% mammary tissue; 1, 3.2x2.3 mm folded fibrous piece with a few mammary ducts
|
Acceptable
|
 |
GTEX-PSDG
|
41-50
|
Male
|
GTEX-PSDG-1726 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 10x3mm, mucosa 1 mm, well-preserved fundic mucosa except for foveolar
|
Acceptable
|
 |
GTEX-PSDG
|
41-50
|
Male
|
GTEX-PSDG-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~10x2.5mm, poorly preserved mucosa
|
Acceptable
|
 |
GTEX-PSDG
|
41-50
|
Male
|
GTEX-PSDG-1926 |
Prostate
|
PAXgene |
1
|
2 pieces, ~8x8 mm; mild atrophy
|
Acceptable
|
 |
GTEX-PSDG
|
41-50
|
Male
|
GTEX-PSDG-2026 |
Urinary bladder
|
PAXgene |
2
|
6 pieces, ~5 x 7mm, mucosa partly sloughed
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces~8.5x2.5mm; many sweat and sebaceous glands; tissue tears
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces~10x4mm,9x6mm; small sweat gland
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces~11x5mm,10x7mm
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0426 |
Heart
|
PAXgene |
1
|
2 pieces ~8mm. foci of patchy fibrosis c/w infarcts
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces,~3.3x1.6mm vein w/30% fat; other piece is only fat
|
Unacceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0626 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces,~4x2mm;4.5x3.5mm; ~30% fat on outside of each piece
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, ~2x1.3 mm. Minimal intimal sclerosis; no adherent fat (good dissection); focal tissue tears (probably not due to fixation)
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0826 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, ~7x7mm;8x5mm; no mammary tissue, all fat and foci of fibrous stroma
|
Unacceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0926 |
Liver
|
PAXgene |
1
|
2 pieces,~7.5x5.5mm;6.5 mm sq. slightly congested
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1026 |
Lung
|
PAXgene |
2
|
2 pieces,~7x4mm; congested
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1126 |
Spleen
|
PAXgene |
2
|
2 pieces,~7mm and 6mm cubed; capsule on one surface; moderately congested
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1226 |
Pancreas
|
PAXgene |
3
|
2 pieces,~9.6x7mm w/50% fat; 5.6x7.7mm w/10% fat
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1326 |
Thyroid gland
|
PAXgene |
2
|
2 pieces,~8.5 and 10x7mm
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1426 |
Aorta
|
PAXgene |
1
|
6 pieces, ~9x1.5mm; focal plaques
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, ~6.8x4.6mm; largest have cassette markings
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces,~6x1.2mm; epithelium 0.3mm
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1726 |
Adrenal glands
|
PAXgene |
2
|
2 pieces,~9x2.6mm; 30-40% periadrenal fat
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces,~5x5mm; no scarred glomeruli; moderately congested
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1926 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces,~11x6 mm half cortex; one piece 6x7mm 10% cortex; collecting ducts severely autolyzed
|
Acceptable
|
 |
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-2026 |
Stomach
|
PAXgene |
2
|
6 pieces,~7.5x2.5mm; mucosa 0.8mm
|
Acceptable
|
 |