GTEX-P4QS
|
61-70
|
Male
|
GTEX-P4QS-2626 |
Thyroid gland
|
PAXgene |
1
|
2 ~10x 3-7mm pieces
|
Acceptable
|
 |
GTEX-P4QS
|
61-70
|
Male
|
GTEX-P4QS-3026 |
Coronary artery
|
PAXgene |
1
|
2 ~3.5mm sections, ~50-60% occlusive atherosclerosis
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-0126 |
Skin, leg
|
PAXgene |
1
|
6 ~5-6x 2.5mm pieces. Squamous epithelium is ~1% of specimen thickness
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, ~8x8mm. One with focal central under-fixation
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-0526 |
Lung
|
PAXgene |
1
|
2 ~7x5mm pieces. Chronic congestion, ? diffuse alveolar damage sequence
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~4x4mm. Squamous mucosa is 10-15% of thickness
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, ~5-10x4mm.
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-0926 |
Spleen
|
PAXgene |
2
|
2 ~9x5mm pieces.
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1026 |
Pancreas
|
PAXgene |
1
|
2 ~ 7x6mm pieces, clean specimens, no fat
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1326 |
Adrenal glands
|
PAXgene |
1
|
2 ~9x5mm pieces, well-preserved
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1426 |
Colon, transverse
|
PAXgene |
2
|
6 well-preserved pieces, ~7x2mm. Mucosa is ~20-25% thickness. Areas of under-fixation with tears
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1526 |
Stomach
|
PAXgene |
1
|
2 pieces. Mucosa extremely well-preserved, ~10 of thickness. Focal poor fixation with tears
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1626 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~8x4mm pieces, areas of poor fixation with tears/holes
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1726 |
Nerve - tibial
|
PAXgene |
2
|
2 pieces, unusually poorly preserved. 1x2mm nerve is surround by fat/connective tissue, nerve is~40% of total specimen
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces of 2 small arteries joined by connective tissue, each ~1mm in diameter. Focal atherosis
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1926 |
Urinary bladder
|
PAXgene |
1
|
6 ~6-10x4mm pieces. Urothelium unusually well- preserved, with patchy chronic cystitis. ~ 1% of specimen thickness
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-2026 |
Uterus
|
PAXgene |
1
|
No endometrial glands/ stroma. 2 ~ 6x8mm pieces, one with a 4.6x4mm leiomyoma. Some areas poorly fixed with tears/holes
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-2126 |
Cervix - ectocervix
|
PAXgene |
0
|
2 ~ 5x5mm pieces. Squamous epithelium well preserved; in well-oriented areas ~4-5% of thickness
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-2226 |
Cervix - endocervix
|
PAXgene |
1
|
2 ~8x6mm pieces. One has a few 0.2-0.3mm glands, fairly well preserved but less than 0.5% of total specimen
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-2326 |
Fallopian tube
|
PAXgene |
1
|
Not fallopian tube, small artery
|
Unacceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-2426 |
Ovary
|
PAXgene |
1
|
2 ~6.6x4.3mm pieces, post-menopausal stroma
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-2526 |
Vagina
|
PAXgene |
1
|
4~ 10x4mm pieces + fragments. Squamous epithelium is 3-5% of specimen thickness
|
Acceptable
|
 |
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-2626 |
Thyroid gland
|
PAXgene |
1
|
16.7x7.1mm. 1.8mm colloid cyst
|
Acceptable
|
 |
GTEX-P78B
|
41-50
|
Female
|
GTEX-P78B-0126 |
Skin, leg
|
PAXgene |
1
|
6 ~10x2 mm pieces. Severe fractured dermis, poorly fixed
|
Acceptable
|
 |
GTEX-P78B
|
41-50
|
Female
|
GTEX-P78B-0226 |
Adipose tissue
|
PAXgene |
1
|
2 overly large pieces, 12x11 and 12.6x7 mm. Both with focal central under-fixation. Staining debris.
|
Acceptable
|
 |