GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-0526 |
Lung
|
PAXgene |
2
|
Diffuse chronic (?acute) interstitial pneumonitis—pending glass slide review.
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-0626 |
Thyroid gland
|
PAXgene |
1
|
Regressive changes/fibrosis. ? late stage Hashimoto’s or medical thyroid suppression
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-0726 |
Liver
|
PAXgene |
1
|
Subcapsular aliquot (9 .5 x 7.5mm aqliquot)
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-0826 |
Aorta
|
PAXgene |
1
|
Endothelium totally sloughed.
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
Muscularis only; no mucosa
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
Mucosa present; approximately 7-9% total specimen thickness
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1126 |
Pancreas
|
PAXgene |
2
|
Typical post mortem peripancreatic saponification. 2.8mm segment of small muscular artery appended to one edge of specimen
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1226 |
Spleen
|
PAXgene |
2
|
Poor fixation centrally.
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1326 |
Adrenal glands
|
PAXgene |
2
|
A 1.5x1.0mm nodule fat appends a 3x5mm aliquot
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1426 |
Kidney - cortex
|
PAXgene |
1
|
1 (glomeruli) to 1 (tubules). Interstital fibrosis, moderate. 3 pieces, average 5 x 6mm
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1526 |
Kidney - cortex
|
PAXgene |
2
|
Not medulla, all cortex .
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1626 |
Ovary
|
PAXgene |
1
|
2mm ovarian fragment with large fibroma (?) pending review of glass
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1726 |
Fallopian tube
|
PAXgene |
1
|
lumen is ~0.4 x0.4mm; overall section is 3.5x3.5mm
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1826 |
Urinary bladder
|
PAXgene |
1
|
urothelium totally sloughed. Specimen thickness is ~4.3mm
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-1926 |
Uterus
|
PAXgene |
2
|
(glands/stroma); 1 (myometrium. A 0.8 x 2.8mm glandular focus on one pole of a 10x 4mm aliquot
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2026 |
Colon, transverse
|
PAXgene |
3
|
Mucosa is ~15--30% of specimen thickness where present; 40-50% is sloughed
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2126 |
Stomach
|
PAXgene |
3
|
Epithelium totally gone from mucosa; only lamina propria elements remain
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2226 |
Cervix - endocervix
|
PAXgene |
1
|
Epithelium is present, beginning to slough
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2326 |
Cervix - ectocervix
|
PAXgene |
1
|
No epithelium is present.
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2426 |
Vagina
|
PAXgene |
1
|
Largely denuded epithelium less than 0.1% of total thickness
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2526 |
Brain - cortex
|
PAXgene |
1
|
Fragment of meninges present in block
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2626 |
Brain - cerebellum
|
PAXgene |
2
|
2(granular layer) 1 (cortex)
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2726 |
Muscle, skeletal
|
PAXgene |
0
|
Appear atrophic; 50% adipose
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2826 |
Artery - tibial
|
PAXgene |
0
|
1 x 2mm nodule of fat attached to 2.6 x 2.8mm vessel
|
Acceptable
|
 |
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2926 |
Nerve - tibial
|
PAXgene |
1
|
Nerve is approximately 80% of specimen; 20 is adipose (along one pole)
|
Acceptable
|
 |