GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2026 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; mucosa largely autolyzed/sloughed, outlined submucosal glands, preserved muscularis, congestion
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2226 |
Stomach
|
PAXgene |
2
|
6 pieces; one piece with fragment of autolyzed gastric mucosa (arrow) and well preserved muscularis
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2326 |
Pancreas
|
PAXgene |
3
|
2 pieces; moderate to severe parenchymal and fat autolysis, ~15% and 5% external fat (arrows), interstitial fibrosis, very rare islets (rep outlined)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2426 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma and autolyzed glandular component ~75%, ~25% well preserved glandular component lined by urothelial epithelium (arrows), ganglion
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2526 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces;~60% glandular and ductal elements and ~40% surrounding fat
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; adipose tissue and ductal structures embedded in loose, cellular connective tissue, c/w gynecomastoid change
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with a few scattered lymphoid aggregates (outlined) and trace of preserved muscularis (arrows), largely fat/submucosa
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2826 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa and lack of muscularis
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis and two pieces with attached fat/vessels up to 2mm (arrows)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-3026 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; Purkinji cells well visualized, focal residual meninges (arrow)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-3126 |
Pituitary gland
|
PAXgene |
2
|
1 piece; predominantly adenohypophysis and tiny focus of neurohypohysis (outlined)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-3226 |
Brain - cortex
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; minimal congestion; well defined lymphoid tissue
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces: 1 with 40% oncocytic change [labeled], other with 5% and with 50% large blood vessels and stroma
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; atrophic ducts and lobules
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0426 |
Lung
|
PAXgene |
1
|
2 pieces; moderate emphysema
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0526 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; 5-10% dermal fat
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0626 |
Pancreas
|
PAXgene |
1
|
2 pieces; well preserved; 5% internal fat
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0726 |
Aorta
|
PAXgene |
1
|
6 pieces; flat plaques; up to 1 mm adherent adventitia
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0826 |
Uterus
|
PAXgene |
1
|
2 pieces; moderate adenomyosis; small amount of atrophic endometrium
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-0926 |
Omentum
|
PAXgene |
1
|
2 pieces; 5% fibrous content
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-1026 |
Stomach
|
PAXgene |
1
|
6 pieces; mucosa and submucosa only, no muscularis propria
|
Acceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-1126 |
Ileum
|
PAXgene |
1
|
6 pieces; only 1 piece has lymphoid tissue; remainder are all muscularis propria; LCM
|
Unacceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; no mucosa, only muscularis propria
|
Acceptable
|
 |