GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed, muscle intact; pericolonic fat is atrophic as in omentum
|
Acceptable
|
|
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2526 |
Ileum
|
PAXgene |
1
|
5 pieces; abundant lymphoid tissue in 3 pieces
|
Acceptable
|
|
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected muscularis
|
Acceptable
|
|
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2726 |
Brain - cortex
|
PAXgene |
1
|
5 pieces
|
Acceptable
|
|
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2826 |
Brain - cerebellum
|
PAXgene |
1
|
5 fragmented pieces
|
Acceptable
|
|
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece; no neural tissue in this cut
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces; well trimmed with 5 - 20% dermal fat
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; <5% fibrous content
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; <5% fat content
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; thin band of external fat around 1 piece [0.2mm thick]
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; well dissected, lesion free
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0626 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well dissected; dermal fat <5%
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0726 |
Liver
|
PAXgene |
1
|
2 pieces; extensive central necrosis consistent with chemical/medication injury or prolonged hypotension
|
Unacceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0826 |
Lung
|
PAXgene |
1
|
2 pieces; atelectatic (?procedural); 1.5mm2 fibrovascular focus at one edge
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0926 |
Stomach
|
PAXgene |
1
|
6 pieces; 3 full thickness, 1 mucosa only, 1 mostly muscle, 1 all muscle; mucosa, where present, very well preserved
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-1026 |
Omentum
|
PAXgene |
0
|
2 pieces; 1 with 10% fibrous content, other with <5%
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-1126 |
Ileum
|
PAXgene |
1
|
5 pieces; well preserved lymphoid nodules; abundant well preserved mucosa; LCM
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; all full thickness; well preserved
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-1326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis with varying amounts of fibrous and fatty tissue up to 30%
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-1426 |
Ovary
|
PAXgene |
1
|
2 pieces; large corpus luteum occupies 70% of 1 piece and 30% of the other
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-1526 |
Vagina
|
PAXgene |
1
|
6 pieces; foci of chronic inflammation
|
Acceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-1626 |
Uterus
|
PAXgene |
0
|
2 pieces; all myometrium
|
Acceptable
|
|
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, mild goitrous features. ~1mm nubbin of adherent fat, delineated
|
Acceptable
|
|
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-0326 |
Coronary artery
|
PAXgene |
1
|
2 pieces, coronary branch twigs (rep delineated), not main coronary artery, mainly epicardial fat
|
Unacceptable
|
|