NIH, National Cancer Institute, Division of Cancer Treatment and Diagnosis (DCTD) NIH - National Institutes of Health National Cancer Institute DCTD - Division of Cancer Treatment and Diagnosis

GTEx Histological Images

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Case ID Age Gender Specimen ID Tissue Type Fixative Autolysis Pathology Review Comments Acceptability Action
GTEX-1JMPZ 21-40 Male GTEX-1JMPZ-2426 Colon, transverse PAXgene 2 6 pieces; mucosa autolyzed, muscle intact; pericolonic fat is atrophic as in omentum Acceptable View Image
GTEX-1JMPZ 21-40 Male GTEX-1JMPZ-2526 Ileum PAXgene 1 5 pieces; abundant lymphoid tissue in 3 pieces Acceptable View Image
GTEX-1JMPZ 21-40 Male GTEX-1JMPZ-2626 Colon, sigmoid PAXgene 1 6 pieces; well dissected muscularis Acceptable View Image
GTEX-1JMPZ 21-40 Male GTEX-1JMPZ-2726 Brain - cortex PAXgene 1 5 pieces Acceptable View Image
GTEX-1JMPZ 21-40 Male GTEX-1JMPZ-2826 Brain - cerebellum PAXgene 1 5 fragmented pieces Acceptable View Image
GTEX-1JMPZ 21-40 Male GTEX-1JMPZ-2926 Pituitary gland PAXgene 1 1 piece; no neural tissue in this cut Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0126 Skin, leg PAXgene 0 6 pieces; well trimmed with 5 - 20% dermal fat Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0226 Adipose tissue PAXgene 0 2 pieces; <5% fibrous content Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0326 Muscle, skeletal PAXgene 0 2 pieces; <5% fat content Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0426 Nerve - tibial PAXgene 1 2 pieces; thin band of external fat around 1 piece [0.2mm thick] Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0526 Artery - tibial PAXgene 0 2 pieces; well dissected, lesion free Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0626 Skin, suprapubic PAXgene 1 6 pieces; well dissected; dermal fat <5% Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0726 Liver PAXgene 1 2 pieces; extensive central necrosis consistent with chemical/medication injury or prolonged hypotension Unacceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0826 Lung PAXgene 1 2 pieces; atelectatic (?procedural); 1.5mm2 fibrovascular focus at one edge Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-0926 Stomach PAXgene 1 6 pieces; 3 full thickness, 1 mucosa only, 1 mostly muscle, 1 all muscle; mucosa, where present, very well preserved Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-1026 Omentum PAXgene 0 2 pieces; 1 with 10% fibrous content, other with <5% Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-1126 Ileum PAXgene 1 5 pieces; well preserved lymphoid nodules; abundant well preserved mucosa; LCM Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-1226 Colon, transverse PAXgene 1 6 pieces; all full thickness; well preserved Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-1326 Colon, sigmoid PAXgene 1 6 pieces; muscularis with varying amounts of fibrous and fatty tissue up to 30% Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-1426 Ovary PAXgene 1 2 pieces; large corpus luteum occupies 70% of 1 piece and 30% of the other Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-1526 Vagina PAXgene 1 6 pieces; foci of chronic inflammation Acceptable View Image
GTEX-1JN76 21-40 Female GTEX-1JN76-1626 Uterus PAXgene 0 2 pieces; all myometrium Acceptable View Image
GTEX-1K2DU 21-40 Male GTEX-1K2DU-0126 Thyroid gland PAXgene 1 2 pieces, mild goitrous features. ~1mm nubbin of adherent fat, delineated Acceptable View Image
GTEX-1K2DU 21-40 Male GTEX-1K2DU-0226 Atrial appendage PAXgene 1 2 pieces, no abnormalities Acceptable View Image
GTEX-1K2DU 21-40 Male GTEX-1K2DU-0326 Coronary artery PAXgene 1 2 pieces, coronary branch twigs (rep delineated), not main coronary artery, mainly epicardial fat Unacceptable View Image