GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1126 |
Spleen
|
PAXgene |
1
|
2 pieces; mildly congested
|
Acceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1226 |
Omentum
|
PAXgene |
0
|
2 pieces; adipose tissue with minimal fibrous content
|
Acceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1326 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; well dissected muscularis
|
Acceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1426 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; all with both mucosa & muscularis propria
|
Unacceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1526 |
Stomach
|
PAXgene |
1
|
6 pieces; muscularis only, no mucosa
|
Unacceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1626 |
Testis
|
PAXgene |
1
|
2 pieces; active spermatogenesis
|
Acceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1726 |
Prostate
|
PAXgene |
1
|
2 pieces; no hyperplasia
|
Acceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; muscle only, no mucosa
|
Unacceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; well preserved; abundant mucus in lumen
|
Acceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 2 pieces have mucosa attached, 2 and 2.5mm long [labeled]
|
Acceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-2126 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; moderate chronic esophagitis (focal lymphoid deposits in lamina propria)
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; includes attachment of fat/vessels (5 and 15%); some interstitial fibrosis and few collections of lymphocytes
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed hair-bearing skin
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0326 |
Omentum
|
PAXgene |
0
|
2 pieces; lobulated mature fat, includes few larger vessels
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; minimal fat, predominantly dense fibrocollagenous stroma with numerous embedded ducts; detached floater
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; muscularis with significant admixture of smooth and skeletal muscle suggesting sampling of upper esophagus
|
Unacceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; includes few lymphoid aggregates and clusters of submucosal glands
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0926 |
Stomach
|
PAXgene |
1
|
6 pieces; full thickness sections, mild chronic gastritis
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-1026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; predominantly target muscularis, but residual submucosa and strip of mucosa
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-1126 |
Ileum
|
PAXgene |
1
|
6 pieces; predominantly mucosa with few strips of residual muscularis (not target) and only rare lymphoid aggregate
|
Unacceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-1226 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-1326 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed, epidermis measured 38 microns
|
Acceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-1426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; fat with 10-15% fibrous tissue/vessels/nerve
|
Acceptable
|
|