GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0526 |
Coronary artery
|
PAXgene |
1
|
2 ~1mm d pieces, less than 20% of aliquot; rest is fat
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0626 |
Heart
|
PAXgene |
0
|
2 ~12x7mm pieces; one is ~30% epicardial fat
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0726 |
Lung
|
PAXgene |
1
|
2 ~6.5x5mm pieces. Well preserved; no inflammation; pronounced emphasymatous changes
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~8x4mm pieces
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
4 ~ 3x2.5mm pieces; mucosae is ~10 of specimen thickness
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1026 |
Pancreas
|
PAXgene |
1
|
2 ~ 8x8mm pieces; only ~10% on one edge is pancreas, well-preserved. Rest is adipose tissue
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1126 |
Colon, transverse
|
PAXgene |
1
|
6 ~5-6mm pieces. Areas of poor fixation. Mucosa is ~ 10% specimen thickness
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1226 |
Stomach
|
PAXgene |
2
|
6 ~10x4mm pieces; mucosa is ~25% specimen thickness but with partial-total autolysis
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1326 |
Urinary bladder
|
PAXgene |
1
|
6 ~8x4 mm pieces, 4 with urothelium, reasonably well-preserved, ~2.5% of specimen thickness
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1526 |
Testis
|
PAXgene |
1
|
2 ~ 8 .56mm pieces, one with attached 7x4mm piece of fibrous tissue
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1626 |
Nerve - tibial
|
PAXgene |
1
|
2 ~ 2.5x1mm nerve pieces; attached fat is ~ 50% of each aliquot
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1726 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~ 9x4.5mm pieces. Areas of underfixation, tears/holes. ~ 10% interspersed fat
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1826 |
Adipose tissue
|
PAXgene |
1
|
2 ~13x9mm pieces. Well fixed
|
Acceptable
|
 |
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-2026 |
Skin, leg
|
PAXgene |
1
|
6 ~7x2mm pieces; squamous epithelium is ~ 2-3% of specimen thickness
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0126 |
Spleen
|
PAXgene |
1
|
2, ~11x7 mm pieces. Moderate congestion. Capsule present
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0226 |
Adrenal glands
|
PAXgene |
1
|
2, ~3x7mm adrenal cortex and medulla, well preserved. 3x0.6mm attached nerve in one
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0326 |
Aorta
|
PAXgene |
1
|
6 pieces. 10x1.3mm. no fatty deposits. Sparse adherent stroma
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0426 |
Lung
|
PAXgene |
1
|
2 ~10x7 & 8x7mm pieces. Patchy bronchopneumonia
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces,~5 mm sq with well preserved epithelium (0.25 mm thick)
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
5 pieces, ~9x4.5 mm. well-oriented specimens.
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0726 |
Pancreas
|
PAXgene |
0
|
2, ~ 10x8 mm pieces,<1% fat; focal fixation fractures
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0826 |
Stomach
|
PAXgene |
1
|
6 pieces, ~7x4.5mm. Very good mucosal (0.87mm) preservation in 2 pieces; none in others
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0926 |
Colon, transverse
|
PAXgene |
1
|
4 pieces, 7x2mm. Good mucosal preservation. Tissue separation with tears
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1026 |
Urinary bladder
|
PAXgene |
1
|
6 ~10x4.8mm pieces. Well preserved epithelium in 3 pieces; none in other 3. Moderate submucosal edema. Moderate fixation artifacts.
|
Acceptable
|
 |
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1126 |
Prostate
|
PAXgene |
1
|
2 ~10x10 & 9 x 6mm; focal atrophy
|
Acceptable
|
 |