GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-0626 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; severe lymphocytic thyroiditis (Hashimoto)
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-0726 |
Lung
|
PAXgene |
2
|
2 pieces; patchy emphysema and fibrosis; pulmonary edema & congestion
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-1226 |
Liver
|
PAXgene |
2
|
2 pieces; periportal fragmentation of cord cells greater than central
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-1426 |
Pancreas
|
PAXgene |
2
|
2 pieces; about a third is severely autolyzed; 10% internal fat
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-1626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces: 1 with 80% fat, other with 20% vascular muscle
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-1726 |
Stomach
|
PAXgene |
2
|
6 pieces; superficial glands severely autolyzed
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces: over 50% is medulla
|
Unacceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2226 |
Testis
|
PAXgene |
2
|
2 pieces; reduced spermatogenesis; 1 piece has 20% hyalinized tubules [marked] and Leydig cell hyperplasia
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2326 |
Prostate
|
PAXgene |
2
|
2 pieces; nodular glandular hyperplasia; glands have moderate to severe autolysis
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces: all have mucosa as well as muscularis
|
Unacceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2626 |
Skin, suprapubic
|
PAXgene |
2
|
6 pieces; well-trimmed hair-bearing skin; 10% dermal fat
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; glands largely autolyzed, muscle intact
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2826 |
Ileum
|
PAXgene |
2
|
4 pieces; abundant but moderately autolyzed lymphoid tissue; muscle in 2 of 4
|
Acceptable
|
|
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2926 |
Pituitary gland
|
PAXgene |
2
|
1 piece; no neural component
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces; mildly periductal fibrosis (arrows); PanIN 1A changes in ducts
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1726 |
Spleen
|
PAXgene |
2
|
2 fragmented pieces; congestion; 1 mm floater of pancreatic tissue (outlined); sparse lymphoid tissue
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and a few scattered residual lymphoid aggregates (outlined) representing ~5% of tissue, too few to warrant analysis except for LCM
|
Unacceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and preserved muscularis on 3 of 6 samples (arrows)
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2026 |
Adrenal glands
|
PAXgene |
2
|
3 pieces; moderately autolyzed adrenal cortex with fatty degeneration and ~20% internal and external fat; two smooth muscle fragments (outlined)
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; numerous variably sized simple cysts; renal cortex with severe arterio and arteriolonephrosclerosis and ~90% hyalinized glomeruli; focal tubular calcifications (outlined)
|
Unacceptable
|
|
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0726 |
Spleen
|
PAXgene |
2
|
2 pieces; congested and fragmented
|
Acceptable
|
|
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0826 |
Pancreas
|
PAXgene |
2
|
2 pieces: large vessels in one, 10% internall fat in the other
|
Acceptable
|
|
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1226 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa largely autolyzed; muscu;aris preserved
|
Acceptable
|
|
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1426 |
Uterus
|
PAXgene |
2
|
2 pieces; small focus of autolyzed, atrophic endometrium [labeled]; remainder is preserved myometrium
|
Acceptable
|
|
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; advanced nodular glomerulosclerosis consistent with diabetes; limited value due to disease
|
Unacceptable
|
|